Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2330

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,483,496	-		Psest_2329	0.25	+0.7
2,483,533	+		Psest_2329	0.28	-1.0
2,483,533	+		Psest_2329	0.28	-0.9
2,483,533	+		Psest_2329	0.28	+0.4
2,483,533	+		Psest_2329	0.28	+0.7
2,483,533	+		Psest_2329	0.28	+0.7
2,483,533	+		Psest_2329	0.28	+1.4
2,483,533	+		Psest_2329	0.28	-0.4
2,483,533	+		Psest_2329	0.28	-1.0
2,483,533	+		Psest_2329	0.28	+0.3
2,483,533	+		Psest_2329	0.28	+0.1
2,483,534	-		Psest_2329	0.29	+0.3
2,483,534	-		Psest_2329	0.29	+1.0
2,483,534	-		Psest_2329	0.29	+0.8
2,483,534	-		Psest_2329	0.29	+1.1
2,483,534	-		Psest_2329	0.29	+2.0
2,483,534	-		Psest_2329	0.29	+0.9
2,483,534	-		Psest_2329	0.29	-0.4
2,483,534	-		Psest_2329	0.29	+0.5
2,483,534	-		Psest_2329	0.29	+0.4
2,483,534	-		Psest_2329	0.29	+1.3
2,483,534	-		Psest_2329	0.29	-0.3
2,483,534	-		Psest_2329	0.29	+0.6
2,483,534	-		Psest_2329	0.29	-0.1
2,483,534	-		Psest_2329	0.29	-0.5
2,483,610	+		Psest_2329	0.36	+0.3
2,483,611	-		Psest_2329	0.36	+0.2
2,483,611	-		Psest_2329	0.36	+0.1
2,483,641	+		Psest_2329	0.39	+0.0
2,483,641	+		Psest_2329	0.39	+0.5
2,483,641	+		Psest_2329	0.39	+0.7
2,483,641	+		Psest_2329	0.39	-0.4
2,483,641	+		Psest_2329	0.39	+0.6
2,483,641	+		Psest_2329	0.39	-0.1
2,483,641	+		Psest_2329	0.39	+0.2
2,483,641	+		Psest_2329	0.39	-0.1
2,483,641	+		Psest_2329	0.39	+0.2
2,483,642	-		Psest_2329	0.40	+1.1
2,483,642	-		Psest_2329	0.40	+0.2
2,483,642	-		Psest_2329	0.40	+0.6
2,483,642	-		Psest_2329	0.40	+0.7
2,483,642	-		Psest_2329	0.40	+1.3
2,483,642	-		Psest_2329	0.40	-0.4
2,483,642	-		Psest_2329	0.40	+1.5
2,483,642	-		Psest_2329	0.40	+4.1
2,483,855	+		Psest_2329	0.61	+0.3
2,483,855	+		Psest_2329	0.61	-0.9
2,483,855	+		Psest_2329	0.61	-0.2
2,483,855	+		Psest_2329	0.61	-0.9
2,483,856	-		Psest_2329	0.62	-1.3
2,483,856	-		Psest_2329	0.62	-1.1
2,483,856	-		Psest_2329	0.62	-0.4
2,483,856	-		Psest_2329	0.62	+0.7
2,483,856	-		Psest_2329	0.62	+1.1
2,483,856	-		Psest_2329	0.62	-0.2
2,483,856	-		Psest_2329	0.62	-0.5
2,483,856	-		Psest_2329	0.62	+1.3
2,483,856	-		Psest_2329	0.62	+0.3
2,483,875	+		Psest_2329	0.63	+1.3
2,483,876	-		Psest_2329	0.64	+1.9
2,483,876	-		Psest_2329	0.64	+1.3
2,484,149	+				-0.6
2,484,149	+				+0.2
2,484,149	+				+2.2
2,484,150	-				+0.6
2,484,208	+				-1.3
2,484,208	+				-1.3
2,484,208	+				+0.7
2,484,208	+				+0.3
2,484,208	+				+0.5
2,484,208	+				+1.8
2,484,209	-				+2.5
2,484,209	-				-0.5
2,484,209	-				+1.6
2,484,209	-				+0.7
2,484,230	+				+0.7
2,484,230	+				+0.4
2,484,231	-				+0.9
2,484,274	+				+0.5
2,484,274	+				-0.2
2,484,274	+				+0.8
2,484,274	+				+0.7
2,484,274	+				-0.1
2,484,274	+				+1.7
2,484,275	-				+0.2
2,484,275	-				+2.3
2,484,275	-				-0.2
2,484,275	-				-0.5
2,484,275	-				-0.4
2,484,275	-				+0.2
2,484,275	-				+0.3
2,484,276	+				+0.1
2,484,277	-				-1.2
2,484,305	+				+1.7
2,484,305	+				-0.8
2,484,306	-				+0.6
2,484,306	-				+0.5
2,484,441	-				+1.6
2,484,472	+				+1.3
2,484,473	-				+1.1
2,484,503	+		Psest_2330	0.11	+1.2
2,484,503	+		Psest_2330	0.11	-1.3
2,484,503	+		Psest_2330	0.11	-1.3
2,484,503	+		Psest_2330	0.11	+1.1
2,484,503	+		Psest_2330	0.11	+1.0
2,484,503	+		Psest_2330	0.11	+0.6
2,484,504	-		Psest_2330	0.11	+2.7
2,484,504	-		Psest_2330	0.11	+3.6
2,484,504	-		Psest_2330	0.11	-1.0
2,484,504	-		Psest_2330	0.11	+2.0
2,484,504	-		Psest_2330	0.11	-0.2
2,484,504	-		Psest_2330	0.11	+0.6
2,484,504	-		Psest_2330	0.11	+0.4
2,484,504	-		Psest_2330	0.11	+0.9
2,484,504	-		Psest_2330	0.11	+1.8
2,484,504	-		Psest_2330	0.11	+1.3
2,484,504	-		Psest_2330	0.11	-1.1
2,484,548	+		Psest_2330	0.15	+2.0
2,484,549	-		Psest_2330	0.16	+2.1
2,484,549	-		Psest_2330	0.16	+1.2
2,484,549	-		Psest_2330	0.16	+2.1
2,484,549	-		Psest_2330	0.16	+0.0
2,484,549	-		Psest_2330	0.16	+0.0
2,484,549	-		Psest_2330	0.16	-0.7
2,484,563	+		Psest_2330	0.17	+0.6
2,484,564	-		Psest_2330	0.17	-0.2
2,484,621	+		Psest_2330	0.23	+1.0
2,484,622	-		Psest_2330	0.23	+1.0
2,484,622	-		Psest_2330	0.23	+0.5
2,484,622	-		Psest_2330	0.23	+0.9
2,484,622	-		Psest_2330	0.23	+0.3
2,484,622	-		Psest_2330	0.23	+1.4
2,484,712	-		Psest_2330	0.33	+1.3
2,484,749	-		Psest_2330	0.36	+2.1
2,484,991	-		Psest_2330	0.62	-1.2
2,484,997	+		Psest_2330	0.62	+0.9
2,484,997	+		Psest_2330	0.62	+0.5
2,484,997	+		Psest_2330	0.62	+1.6
2,484,998	-		Psest_2330	0.62	+1.9
2,484,998	-		Psest_2330	0.62	+0.8
2,484,998	-		Psest_2330	0.62	+0.6
2,484,998	-		Psest_2330	0.62	+1.5
2,484,998	-		Psest_2330	0.62	+1.4
2,484,998	-		Psest_2330	0.62	+0.3
2,484,998	-		Psest_2330	0.62	+2.5
2,484,998	-		Psest_2330	0.62	+0.7
2,484,998	-		Psest_2330	0.62	+1.3
2,484,998	-		Psest_2330	0.62	+2.0
2,485,001	+		Psest_2330	0.63	+0.5
2,485,001	+		Psest_2330	0.63	+1.8
2,485,001	+		Psest_2330	0.63	-1.2
2,485,002	-		Psest_2330	0.63	+1.6
2,485,002	-		Psest_2330	0.63	+0.3
2,485,163	+		Psest_2330	0.80	+0.3
2,485,298	+				-0.7
2,485,298	+				-1.4
2,485,298	+				+0.5
2,485,299	-				+0.1
2,485,299	-				-0.6
2,485,356	+				+0.6
2,485,357	-				+0.9
2,485,357	-				+0.7
2,485,357	-				-0.0
2,485,357	-				+0.9
2,485,357	-				+1.3
2,485,357	-				+1.6
2,485,357	-				+3.2
2,485,357	-				+1.4
2,485,357	-				+1.1
2,485,357	-				-1.1
2,485,357	-				+1.3
2,485,488	-				+1.7
2,485,558	+				-0.1
2,485,558	+				+0.2
2,485,558	+				+0.2
2,485,559	-				+1.1
2,485,559	-				-0.1
2,485,559	-				-2.0
2,485,559	-				+1.9
2,485,612	+				+1.8
2,485,613	-				+1.0
2,485,629	-				-0.8
2,485,667	+				+0.1
2,485,869	-		Psest_2331	0.23	-0.0
2,485,901	-		Psest_2331	0.26	+0.5
2,485,921	-		Psest_2331	0.28	+1.7
2,485,954	+		Psest_2331	0.31	+1.5
2,485,954	+		Psest_2331	0.31	+0.3
2,485,954	+		Psest_2331	0.31	-0.9
2,485,954	+		Psest_2331	0.31	-0.6
2,485,955	-		Psest_2331	0.31	+1.6
2,485,955	-		Psest_2331	0.31	+1.3
2,485,957	-		Psest_2331	0.31	-0.8
2,486,074	+		Psest_2331	0.42	+0.3
2,486,075	-		Psest_2331	0.42	+1.2
2,486,075	-		Psest_2331	0.42	+1.5
2,486,075	-		Psest_2331	0.42	+1.1
2,486,303	-		Psest_2331	0.64	+0.4
2,486,303	-		Psest_2331	0.64	+1.0
2,486,340	+		Psest_2331	0.67	-2.1
2,486,340	+		Psest_2331	0.67	+0.7
2,486,341	-		Psest_2331	0.67	+1.8
2,486,344	+		Psest_2331	0.67	-1.2
2,486,345	-		Psest_2331	0.68	-1.9
2,486,345	-		Psest_2331	0.68	+0.6
2,486,345	-		Psest_2331	0.68	+0.7
2,486,345	-		Psest_2331	0.68	-1.2
2,486,345	-		Psest_2331	0.68	+1.9