Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2314

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,463,900	-		Psest_2312	0.18	+0.7
2,463,900	-		Psest_2312	0.18	-2.2
2,463,900	-		Psest_2312	0.18	-0.2
2,463,900	-		Psest_2312	0.18	+0.8
2,463,902	-		Psest_2312	0.18	+1.8
2,463,902	-		Psest_2312	0.18	+1.6
2,463,902	-		Psest_2312	0.18	+2.5
2,463,902	-		Psest_2312	0.18	+1.6
2,463,902	-		Psest_2312	0.18	-1.0
2,463,902	-		Psest_2312	0.18	+1.6
2,463,902	-		Psest_2312	0.18	+0.2
2,463,902	-		Psest_2312	0.18	+0.9
2,463,915	-		Psest_2312	0.20	-2.0
2,463,915	-		Psest_2312	0.20	+1.3
2,463,915	-		Psest_2312	0.20	+1.2
2,463,915	-		Psest_2312	0.20	-0.3
2,464,014	-		Psest_2312	0.32	+2.7
2,464,014	-		Psest_2312	0.32	+0.2
2,464,014	-		Psest_2312	0.32	-1.7
2,464,014	-		Psest_2312	0.32	+0.4
2,464,014	-		Psest_2312	0.32	+1.8
2,464,014	-		Psest_2312	0.32	+0.1
2,464,040	-		Psest_2312	0.35	-0.7
2,464,040	-		Psest_2312	0.35	+0.1
2,464,040	-		Psest_2312	0.35	+0.5
2,464,311	-		Psest_2312	0.68	-1.9
2,464,311	-		Psest_2312	0.68	+1.3
2,464,345	-		Psest_2312	0.72	+1.3
2,464,345	-		Psest_2312	0.72	-0.3
2,464,345	-		Psest_2312	0.72	+0.3
2,464,345	-		Psest_2312	0.72	+2.7
2,464,345	-		Psest_2312	0.72	+0.5
2,464,349	-		Psest_2312	0.72	+1.9
2,464,349	-		Psest_2312	0.72	+1.6
2,464,349	-		Psest_2312	0.72	-0.1
2,464,349	-		Psest_2312	0.72	+0.7
2,464,838	-				-0.2
2,464,838	-				+0.9
2,464,838	-				+0.2
2,464,838	-				+0.3
2,464,959	+				+0.8
2,465,058	+		Psest_2314	0.18	+1.7
2,465,058	+		Psest_2314	0.18	-1.6
2,465,058	+		Psest_2314	0.18	+0.7
2,465,058	+		Psest_2314	0.18	+2.3
2,465,058	+		Psest_2314	0.18	+0.8
2,465,058	+		Psest_2314	0.18	+2.9
2,465,058	+		Psest_2314	0.18	+0.7
2,465,059	-		Psest_2314	0.18	+0.7
2,465,059	-		Psest_2314	0.18	+0.9
2,465,059	-		Psest_2314	0.18	+4.5
2,465,059	-		Psest_2314	0.18	+1.3
2,465,320	+		Psest_2314	0.44	+1.1
2,465,320	+		Psest_2314	0.44	+0.5
2,465,320	+		Psest_2314	0.44	+0.1
2,465,321	-		Psest_2314	0.45	-1.0
2,465,393	+		Psest_2314	0.52	+0.5
2,465,422	-		Psest_2314	0.55	+0.3
2,465,698	+		Psest_2314	0.82	+1.7
2,465,698	+		Psest_2314	0.82	+0.8
2,465,698	+		Psest_2314	0.82	+1.2
2,465,698	+		Psest_2314	0.82	-1.0
2,465,703	-		Psest_2314	0.83	+1.4
2,465,703	-		Psest_2314	0.83	-1.2
2,465,822	+				-0.3
2,465,874	+				-0.8
2,465,875	-				-1.3
2,465,875	-				-1.5
2,465,875	-				-0.3
2,465,875	-				+0.4
2,466,011	+		Psest_2315	0.11	-0.1
2,466,011	+		Psest_2315	0.11	-0.6
2,466,012	-		Psest_2315	0.11	+2.0
2,466,012	-		Psest_2315	0.11	-1.2
2,466,012	-		Psest_2315	0.11	-0.8
2,466,012	-		Psest_2315	0.11	+0.8
2,466,017	+		Psest_2315	0.12	+1.0
2,466,018	-		Psest_2315	0.13	-0.2
2,466,018	-		Psest_2315	0.13	-1.0
2,466,167	+		Psest_2315	0.43	+0.7
2,466,167	+		Psest_2315	0.43	+1.8
2,466,167	+		Psest_2315	0.43	+1.1
2,466,167	+		Psest_2315	0.43	-0.9
2,466,167	+		Psest_2315	0.43	-2.1
2,466,168	-		Psest_2315	0.43	-0.3
2,466,168	-		Psest_2315	0.43	-0.1
2,466,168	-		Psest_2315	0.43	+0.2
2,466,410	+				-1.3
2,466,437	+				+1.4
2,466,437	+				+1.3
2,466,437	+				-0.3
2,466,437	+				+0.2
2,466,437	+				+1.5
2,466,437	+				-1.2
2,466,437	+				+2.4
2,466,437	+				+0.7
2,466,437	+				+1.9
2,466,437	+				+1.4
2,466,437	+				+1.6
2,466,438	-				-0.6
2,466,438	-				-0.0
2,466,438	-				-0.7
2,466,438	-				-0.4
2,466,486	+				+2.1
2,466,486	+				-0.9
2,466,494	+				+0.2
2,466,496	+				+0.3
2,466,496	+				+0.4
2,466,496	+				+1.8
2,466,496	+				+1.5
2,466,496	+				-0.5
2,466,497	-				+0.9
2,466,497	-				+0.2
2,466,497	-				-1.7
2,466,497	-				+0.5
2,466,497	-				+1.3
2,466,506	+				-0.2
2,466,506	+				+0.8
2,466,506	+				+2.1
2,466,506	+				+2.1
2,466,525	+				+1.1
2,466,525	+				-1.1
2,466,525	+				+0.6
2,466,612	+				+1.4
2,466,742	+				-0.4
2,466,743	-				+0.7
2,466,743	-				-1.3
2,466,750	+				+1.3
2,466,750	+				+1.4
2,466,750	+				+1.1
2,466,750	+				+5.7
2,466,751	-				+1.7
2,466,751	-				+2.0