Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2260

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,405,544	+		Psest_2259	0.46	-1.0
2,405,627	+		Psest_2259	0.50	-0.3
2,405,628	-		Psest_2259	0.50	-2.5
2,405,628	-		Psest_2259	0.50	-0.2
2,405,630	+		Psest_2259	0.50	+0.3
2,405,630	+		Psest_2259	0.50	+0.1
2,405,650	+		Psest_2259	0.51	+0.1
2,405,782	+		Psest_2259	0.59	-0.7
2,405,782	+		Psest_2259	0.59	-1.8
2,405,783	-		Psest_2259	0.59	-1.9
2,405,783	-		Psest_2259	0.59	-3.0
2,405,783	-		Psest_2259	0.59	+1.1
2,405,783	-		Psest_2259	0.59	-0.0
2,405,783	-		Psest_2259	0.59	-1.0
2,405,962	+		Psest_2259	0.69	-0.2
2,405,963	-		Psest_2259	0.69	-2.1
2,405,963	-		Psest_2259	0.69	-1.2
2,405,975	+		Psest_2259	0.69	-1.5
2,406,030	-		Psest_2259	0.72	+0.9
2,406,062	+		Psest_2259	0.74	+0.7
2,406,062	+		Psest_2259	0.74	+0.9
2,406,062	+		Psest_2259	0.74	-0.7
2,406,153	-		Psest_2259	0.79	-0.5
2,406,220	+		Psest_2259	0.83	-0.1
2,406,220	+		Psest_2259	0.83	-0.6
2,406,220	+		Psest_2259	0.83	+1.3
2,406,220	+		Psest_2259	0.83	-0.8
2,406,221	-		Psest_2259	0.83	+0.7
2,406,221	-		Psest_2259	0.83	+0.3
2,406,221	-		Psest_2259	0.83	+0.1
2,406,221	-		Psest_2259	0.83	+0.1
2,406,221	-		Psest_2259	0.83	+0.3
2,406,221	-		Psest_2259	0.83	-0.8
2,406,221	-		Psest_2259	0.83	-0.0
2,406,221	-		Psest_2259	0.83	-1.3
2,406,224	+		Psest_2259	0.83	+1.6
2,406,224	+		Psest_2259	0.83	-0.1
2,406,224	+		Psest_2259	0.83	-0.5
2,406,237	+		Psest_2259	0.84	-1.8
2,406,237	+		Psest_2259	0.84	-0.3
2,406,238	-		Psest_2259	0.84	-2.0
2,406,238	-		Psest_2259	0.84	-0.3
2,406,238	-		Psest_2259	0.84	+2.2
2,406,258	+		Psest_2259	0.85	-0.7
2,406,258	+		Psest_2259	0.85	+1.3
2,406,258	+		Psest_2259	0.85	+0.2
2,406,258	+		Psest_2259	0.85	-0.9
2,406,259	-		Psest_2259	0.85	-1.1
2,406,259	-		Psest_2259	0.85	-0.3
2,406,259	-		Psest_2259	0.85	+0.3
2,406,260	+		Psest_2259	0.85	-0.3
2,406,260	+		Psest_2259	0.85	-1.9
2,406,260	+		Psest_2259	0.85	-2.2
2,406,260	+		Psest_2259	0.85	+0.7
2,406,260	+		Psest_2259	0.85	-1.7
2,406,260	+		Psest_2259	0.85	-2.0
2,406,260	+		Psest_2259	0.85	-1.3
2,406,260	+		Psest_2259	0.85	+0.5
2,406,399	-				-0.7
2,406,440	+				-0.1
2,406,440	+				-1.2
2,406,440	+				-1.0
2,406,441	-				-0.5
2,406,441	-				-0.8
2,406,441	-				-0.1
2,406,474	-				-1.6
2,406,628	+		Psest_2260	0.15	+0.4
2,406,628	+		Psest_2260	0.15	+1.6
2,406,628	+		Psest_2260	0.15	+0.8
2,406,632	+		Psest_2260	0.15	-0.8
2,406,632	+		Psest_2260	0.15	+1.0
2,406,632	+		Psest_2260	0.15	+0.6
2,406,632	+		Psest_2260	0.15	+0.9
2,406,633	-		Psest_2260	0.15	+0.9
2,406,633	-		Psest_2260	0.15	+1.5
2,406,633	-		Psest_2260	0.15	+3.1
2,406,633	-		Psest_2260	0.15	+1.0
2,406,633	-		Psest_2260	0.15	+1.1
2,406,633	-		Psest_2260	0.15	+1.5
2,406,808	+		Psest_2260	0.42	+1.1
2,406,808	+		Psest_2260	0.42	+0.3
2,406,809	-		Psest_2260	0.43	+1.3
2,406,809	-		Psest_2260	0.43	+1.1
2,406,877	+		Psest_2260	0.53	-0.2
2,407,089	+		Psest_2260	0.86	+0.9
2,407,089	+		Psest_2260	0.86	+0.7
2,407,089	+		Psest_2260	0.86	+0.7
2,407,089	+		Psest_2260	0.86	+0.9
2,407,089	+		Psest_2260	0.86	+1.1
2,407,089	+		Psest_2260	0.86	+1.3
2,407,089	+		Psest_2260	0.86	+0.7
2,407,090	-		Psest_2260	0.86	+0.7
2,407,090	-		Psest_2260	0.86	+1.1
2,407,090	-		Psest_2260	0.86	+1.5
2,407,090	-		Psest_2260	0.86	+1.0
2,407,090	-		Psest_2260	0.86	+0.8
2,407,090	-		Psest_2260	0.86	+0.5
2,407,090	-		Psest_2260	0.86	+0.8
2,407,090	-		Psest_2260	0.86	+0.5
2,407,090	-		Psest_2260	0.86	+2.3
2,407,090	-		Psest_2260	0.86	+0.4
2,407,090	-		Psest_2260	0.86	+0.3
2,407,090	-		Psest_2260	0.86	+1.1
2,407,092	+		Psest_2260	0.87	+0.9
2,407,092	+		Psest_2260	0.87	+0.7
2,407,092	+		Psest_2260	0.87	+0.7
2,407,092	+		Psest_2260	0.87	+1.0
2,407,092	+		Psest_2260	0.87	+1.0
2,407,092	+		Psest_2260	0.87	+0.2
2,407,092	+		Psest_2260	0.87	+0.8
2,407,092	+		Psest_2260	0.87	+0.3
2,407,092	+		Psest_2260	0.87	+0.5
2,407,092	+		Psest_2260	0.87	+1.1
2,407,092	+		Psest_2260	0.87	+1.1
2,407,092	+		Psest_2260	0.87	+1.5
2,407,093	-		Psest_2260	0.87	+1.1
2,407,093	-		Psest_2260	0.87	+1.1
2,407,093	-		Psest_2260	0.87	+1.1
2,407,093	-		Psest_2260	0.87	+0.9
2,407,093	-		Psest_2260	0.87	+0.2
2,407,093	-		Psest_2260	0.87	+1.2
2,407,122	-				+1.3
2,407,122	-				+1.2
2,407,122	-				+1.6
2,407,122	-				+0.5
2,407,172	+				+1.1
2,407,172	+				+0.7
2,407,172	+				-0.2
2,407,201	+				+0.7
2,407,201	+				+0.6
2,407,201	+				+0.6
2,407,201	+				+1.6
2,407,201	+				+0.9
2,407,202	-				-0.8
2,407,240	+				+0.6
2,407,296	+				+0.4
2,407,380	+				+1.2
2,407,395	+				+1.2
2,407,467	+		Psest_2261	0.12	+0.3
2,407,507	+		Psest_2261	0.17	-0.0
2,407,507	+		Psest_2261	0.17	+0.2
2,407,604	-		Psest_2261	0.31	-1.7
2,407,604	-		Psest_2261	0.31	-2.4
2,407,604	-		Psest_2261	0.31	-1.5
2,407,636	+		Psest_2261	0.35	+0.0
2,407,653	+		Psest_2261	0.38	-0.3
2,407,653	+		Psest_2261	0.38	-1.1
2,407,655	+		Psest_2261	0.38	+2.4
2,407,655	+		Psest_2261	0.38	+1.7
2,407,655	+		Psest_2261	0.38	+0.5
2,407,655	+		Psest_2261	0.38	+0.1
2,407,656	-		Psest_2261	0.38	-0.7
2,407,656	-		Psest_2261	0.38	-0.6
2,407,757	-		Psest_2261	0.52	-0.5
2,407,758	+		Psest_2261	0.52	+0.6
2,407,758	+		Psest_2261	0.52	+0.4
2,407,845	-		Psest_2261	0.64	-1.2
2,408,087	+				-0.7
2,408,087	+				-0.2
2,408,110	+				+0.8
2,408,110	+				+1.9
2,408,129	+				+1.4
2,408,129	+				-0.1
2,408,130	-				-2.0
2,408,130	-				+0.0
2,408,145	+				-1.5
2,408,145	+				-0.1