Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2238

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,390,028	+		Psest_2236	0.78	-0.3
2,390,028	+		Psest_2236	0.78	+0.3
2,390,028	+		Psest_2236	0.78	-2.0
2,390,028	+		Psest_2236	0.78	+0.1
2,390,028	+		Psest_2236	0.78	-0.1
2,390,029	-		Psest_2236	0.78	+1.4
2,390,029	-		Psest_2236	0.78	+2.2
2,390,029	-		Psest_2236	0.78	-2.4
2,390,029	-		Psest_2236	0.78	+0.4
2,390,029	-		Psest_2236	0.78	+3.1
2,390,029	-		Psest_2236	0.78	-1.9
2,390,055	+		Psest_2236	0.79	-0.6
2,390,198	-		Psest_2236	0.86	+0.3
2,390,326	+				+1.0
2,390,326	+				-0.9
2,390,352	+				+0.3
2,390,352	+				-0.7
2,390,353	-				+0.0
2,390,353	-				-1.3
2,390,353	-				+1.5
2,390,358	+				-1.3
2,390,358	+				+1.7
2,390,358	+				-1.1
2,390,358	+				+0.5
2,390,358	+				-0.3
2,390,359	-				-0.4
2,390,359	-				+0.2
2,390,359	-				+0.2
2,390,359	-				-0.2
2,390,359	-				+0.8
2,390,359	-				+0.1
2,390,359	-				+0.7
2,390,359	-				-1.7
2,390,359	-				+0.3
2,390,359	-				+0.1
2,390,359	-				+0.1
2,390,359	-				-1.9
2,390,741	+				+0.0
2,390,762	+				+0.5
2,390,762	+				-1.6
2,390,763	-				-0.7
2,390,763	-				-0.7
2,390,844	+				+0.5
2,390,845	-				+0.5
2,390,888	+				+0.2
2,390,889	-				-0.2
2,390,889	-				-0.1
2,390,958	+				+0.1
2,391,042	+		Psest_2238	0.20	+1.1
2,391,042	+		Psest_2238	0.20	+2.4
2,391,042	+		Psest_2238	0.20	+0.5
2,391,043	-		Psest_2238	0.21	+2.3
2,391,058	-		Psest_2238	0.24	+1.6
2,391,184	-		Psest_2238	0.55	-0.8
2,391,225	+		Psest_2238	0.65	-0.1
2,391,226	-		Psest_2238	0.65	+2.3
2,391,664	-		Psest_2239	0.43	-0.9
2,391,664	-		Psest_2239	0.43	-0.9
2,391,720	+		Psest_2239	0.52	-0.4
2,391,720	+		Psest_2239	0.52	+0.4
2,391,837	+		Psest_2239	0.69	+1.9
2,391,852	+		Psest_2239	0.71	-1.2
2,392,106	-				-0.6
2,392,106	-				+0.4
2,392,248	+		Psest_2240	0.33	-1.5
2,392,249	-		Psest_2240	0.33	+2.3
2,392,249	-		Psest_2240	0.33	-0.7
2,392,366	+				+0.3
2,392,366	+				-0.9