Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1883

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
1,993,113	+		Psest_1882	0.58	-0.4
1,993,113	+		Psest_1882	0.58	-1.3
1,993,114	-		Psest_1882	0.58	-1.7
1,993,114	-		Psest_1882	0.58	-0.4
1,993,114	-		Psest_1882	0.58	-3.4
1,993,185	-		Psest_1882	0.63	-0.4
1,993,291	-		Psest_1882	0.71	-1.3
1,993,302	+		Psest_1882	0.72	-1.4
1,993,302	+		Psest_1882	0.72	-2.0
1,993,303	-		Psest_1882	0.72	-0.4
1,993,448	+		Psest_1882	0.82	-1.4
1,993,448	+		Psest_1882	0.82	-1.9
1,993,448	+		Psest_1882	0.82	-1.9
1,993,525	-		Psest_1882	0.88	-1.0
1,993,525	-		Psest_1882	0.88	-0.2
1,993,982	-		Psest_1883	0.50	-0.6
1,994,173	-				-1.4
1,994,195	+				-0.5
1,994,196	-				-0.5
1,994,196	-				-0.7
1,994,277	+				-1.7
1,994,278	-				-0.9
1,994,278	-				+0.5
1,994,342	+				-3.0
1,994,343	-				-0.9
1,994,348	+				-2.7
1,994,349	-				-2.9
1,994,682	+		Psest_1884	0.52	-0.9
1,994,683	-		Psest_1884	0.52	-1.9
1,994,714	+		Psest_1884	0.56	-0.5
1,994,715	-		Psest_1884	0.56	-1.3
1,994,998	+				-3.6
1,994,998	+				+0.1
1,994,998	+				-2.5
1,994,998	+				-3.2
1,994,998	+				-0.5
1,994,998	+				-1.3
1,994,999	-				-0.9
1,995,078	-		Psest_1885	0.14	+0.6