Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1771

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
1,871,476	-				+0.6
1,871,476	-				-0.5
1,871,476	-				-1.7
1,871,492	-				+0.2
1,871,497	+				-0.1
1,871,497	+				+0.4
1,872,273	+		Psest_1770	0.88	-1.2
1,872,274	-		Psest_1770	0.88	-0.6
1,872,288	+		Psest_1770	0.90	+2.3
1,872,327	-				-1.5
1,872,414	-				+1.1
1,872,418	+				-1.1
1,872,418	+				-1.7
1,872,419	-				+1.1
1,872,419	-				+0.2
1,872,419	-				-1.0
1,872,419	-				+1.5
1,872,419	-				+0.4
1,872,419	-				+1.8
1,872,419	-				-0.5
1,872,421	-				-1.2
1,872,421	-				-1.6
1,872,421	-				+1.9
1,872,421	-				+0.8
1,872,421	-				+0.3
1,872,421	-				-0.7
1,872,421	-				-0.7
1,872,421	-				-2.5
1,872,421	-				-0.8
1,872,421	-				+0.3
1,872,421	-				-2.5
1,872,421	-				+1.6
1,872,422	+				-0.6
1,872,422	+				-0.2
1,872,422	+				+0.3
1,872,422	+				-1.5
1,872,422	+				+0.4
1,872,422	+				-2.5
1,872,422	+				+1.6
1,872,422	+				-0.8
1,872,422	+				+0.3
1,872,422	+				+0.1
1,872,422	+				-2.1
1,872,423	-				+1.7
1,872,423	-				-0.6
1,872,423	-				-0.9
1,872,423	-				-0.1
1,872,423	-				+1.7
1,872,423	-				+0.7
1,872,423	-				-2.5
1,872,423	-				-2.3
1,872,423	-				+0.7
1,872,423	-				+1.8
1,872,423	-				+0.7
1,872,423	-				+0.5
1,872,423	-				+0.9
1,872,423	-				+2.9
1,872,423	-				-0.2
1,872,423	-				+0.3
1,872,423	-				-3.5
1,872,423	-				+1.1
1,872,440	+				-0.1
1,872,441	-				-0.8
1,872,456	+				+0.4
1,872,466	+				+1.2
1,872,467	-				-0.1
1,872,525	+		Psest_1771	0.13	-0.4
1,872,617	+		Psest_1771	0.32	+1.3
1,872,617	+		Psest_1771	0.32	+0.7
1,872,617	+		Psest_1771	0.32	+0.6
1,872,618	-		Psest_1771	0.32	-0.7
1,872,725	+		Psest_1771	0.55	-0.5
1,872,738	+		Psest_1771	0.58	-0.1
1,872,738	+		Psest_1771	0.58	-1.0
1,872,738	+		Psest_1771	0.58	-1.6
1,872,739	-		Psest_1771	0.58	-0.7
1,872,739	-		Psest_1771	0.58	-0.2
1,872,739	-		Psest_1771	0.58	+0.7
1,872,739	-		Psest_1771	0.58	+1.2
1,872,739	-		Psest_1771	0.58	-1.5
1,872,739	-		Psest_1771	0.58	+0.1
1,872,739	-		Psest_1771	0.58	+1.0
1,872,740	+		Psest_1771	0.58	-1.3
1,872,740	+		Psest_1771	0.58	+0.3
1,872,740	+		Psest_1771	0.58	+0.7
1,872,740	+		Psest_1771	0.58	-0.0
1,872,740	+		Psest_1771	0.58	+1.1
1,872,741	-		Psest_1771	0.59	-0.9
1,872,741	-		Psest_1771	0.59	+0.1
1,872,741	-		Psest_1771	0.59	+1.5
1,872,742	+		Psest_1771	0.59	-1.5
1,872,742	+		Psest_1771	0.59	+0.6
1,872,742	+		Psest_1771	0.59	+0.1
1,872,743	-		Psest_1771	0.59	-0.1
1,872,743	-		Psest_1771	0.59	-1.7
1,872,847	+		Psest_1771	0.81	-0.5
1,872,847	+		Psest_1771	0.81	+1.5
1,872,848	-		Psest_1771	0.81	+0.8
1,872,848	-		Psest_1771	0.81	-0.2
1,872,877	+		Psest_1771	0.87	-0.9
1,872,910	+				-2.3
1,872,950	+				+0.6
1,872,950	+				-0.5
1,872,950	+				+1.3
1,872,951	-				+1.8
1,873,225	-		Psest_1772	0.24	+2.3
1,873,225	-		Psest_1772	0.24	+1.0
1,873,365	-		Psest_1772	0.35	+2.6
1,873,859	+		Psest_1772	0.76	+2.4
1,873,859	+		Psest_1772	0.76	+2.4
1,873,859	+		Psest_1772	0.76	-1.2
1,873,860	-		Psest_1772	0.76	+1.5
1,873,860	-		Psest_1772	0.76	+0.1
1,873,860	-		Psest_1772	0.76	+0.3
1,873,860	-		Psest_1772	0.76	+0.4
1,873,860	-		Psest_1772	0.76	+1.7
1,873,860	-		Psest_1772	0.76	+1.5
1,873,904	+		Psest_1772	0.80	+0.9
1,873,904	+		Psest_1772	0.80	+0.2