Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1471

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
1,575,680	+		Psest_1470	0.26	-0.7
1,575,681	-		Psest_1470	0.26	-0.6
1,575,750	+		Psest_1470	0.31	-0.2
1,575,750	+		Psest_1470	0.31	+0.9
1,575,751	-		Psest_1470	0.31	-1.8
1,575,751	-		Psest_1470	0.31	+0.5
1,575,751	-		Psest_1470	0.31	-0.4
1,575,751	-		Psest_1470	0.31	+1.2
1,575,867	+		Psest_1470	0.41	+0.2
1,575,867	+		Psest_1470	0.41	+1.2
1,575,868	-		Psest_1470	0.41	+0.4
1,575,868	-		Psest_1470	0.41	-0.8
1,575,934	-		Psest_1470	0.47	+0.3
1,575,934	-		Psest_1470	0.47	+0.2
1,575,934	-		Psest_1470	0.47	-0.2
1,575,946	-		Psest_1470	0.48	-0.6
1,576,140	+		Psest_1470	0.64	+1.4
1,576,140	+		Psest_1470	0.64	+1.0
1,576,140	+		Psest_1470	0.64	-2.0
1,576,179	+		Psest_1470	0.67	+1.1
1,576,179	+		Psest_1470	0.67	+0.3
1,576,180	-		Psest_1470	0.67	-0.3
1,576,180	-		Psest_1470	0.67	+0.3
1,576,188	+		Psest_1470	0.68	-0.2
1,576,189	-		Psest_1470	0.68	-0.1
1,576,189	-		Psest_1470	0.68	-1.4
1,576,189	-		Psest_1470	0.68	+0.2
1,576,392	-		Psest_1470	0.85	-0.4
1,576,470	-				-0.1
1,576,643	+				+0.7
1,576,644	-				-0.3
1,576,644	-				-1.1
1,576,779	+		Psest_1471	0.24	-2.7
1,576,970	+		Psest_1471	0.52	-1.9
1,576,974	+		Psest_1471	0.53	-4.0
1,576,975	-		Psest_1471	0.53	+0.6
1,576,975	-		Psest_1471	0.53	-2.0
1,576,975	-		Psest_1471	0.53	-0.4
1,576,984	-		Psest_1471	0.55	-2.5
1,577,097	+		Psest_1471	0.71	-2.4
1,577,097	+		Psest_1471	0.71	-2.6
1,577,097	+		Psest_1471	0.71	-3.3
1,577,097	+		Psest_1471	0.71	-1.7
1,577,098	-		Psest_1471	0.72	-2.3
1,577,400	+				-1.0
1,577,445	+		Psest_1472	0.14	-1.4
1,577,446	-		Psest_1472	0.14	+0.4
1,577,446	-		Psest_1472	0.14	+1.6
1,577,446	-		Psest_1472	0.14	+1.1
1,577,446	-		Psest_1472	0.14	-1.2
1,577,446	-		Psest_1472	0.14	+1.1
1,577,446	-		Psest_1472	0.14	+0.0
1,577,567	+		Psest_1472	0.31	-1.4
1,577,567	+		Psest_1472	0.31	-1.9
1,577,567	+		Psest_1472	0.31	+0.7
1,577,567	+		Psest_1472	0.31	-3.4
1,577,613	+		Psest_1472	0.38	-1.6
1,577,613	+		Psest_1472	0.38	-3.4
1,577,664	+		Psest_1472	0.45	-2.8
1,577,664	+		Psest_1472	0.45	-0.8
1,577,664	+		Psest_1472	0.45	-1.7
1,577,664	+		Psest_1472	0.45	-1.9
1,577,664	+		Psest_1472	0.45	-0.2
1,577,665	-		Psest_1472	0.45	+1.8
1,577,973	+		Psest_1472	0.88	-1.4
1,577,973	+		Psest_1472	0.88	-0.9
1,577,973	+		Psest_1472	0.88	-1.9
1,577,973	+		Psest_1472	0.88	-1.6
1,577,973	+		Psest_1472	0.88	-3.2
1,577,973	+		Psest_1472	0.88	-0.7
1,577,973	+		Psest_1472	0.88	-2.4
1,577,973	+		Psest_1472	0.88	-1.2
1,577,973	+		Psest_1472	0.88	-2.2
1,577,973	+		Psest_1472	0.88	-0.4
1,577,974	-		Psest_1472	0.88	+0.0
1,577,974	-		Psest_1472	0.88	+0.8
1,577,974	-		Psest_1472	0.88	-0.4
1,578,059	-				-0.5
1,578,065	+				-0.8
1,578,065	+				-0.8
1,578,065	+				-1.5
1,578,173	+		Psest_1473	0.17	+0.7
1,578,192	+		Psest_1473	0.20	-1.3
1,578,192	+		Psest_1473	0.20	-1.3
1,578,193	-		Psest_1473	0.20	+0.5