Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1009

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,092,316	-		Psest_1007	0.22	+1.5
1,092,316	-		Psest_1007	0.22	+2.9
1,092,316	-		Psest_1007	0.22	-0.3
1,092,416	+		Psest_1007	0.34	-0.3
1,092,416	+		Psest_1007	0.34	-2.2
1,092,416	+		Psest_1007	0.34	+1.2
1,092,474	+		Psest_1007	0.40	+1.7
1,092,474	+		Psest_1007	0.40	+0.1
1,092,474	+		Psest_1007	0.40	+2.1
1,092,474	+		Psest_1007	0.40	+0.4
1,092,474	+		Psest_1007	0.40	+1.1
1,092,475	-		Psest_1007	0.40	+0.7
1,092,531	+		Psest_1007	0.46	-0.2
1,092,531	+		Psest_1007	0.46	+0.6
1,092,532	-		Psest_1007	0.46	+2.1
1,092,532	-		Psest_1007	0.46	+1.1
1,092,532	-		Psest_1007	0.46	-2.5
1,092,532	-		Psest_1007	0.46	+0.2
1,092,532	-		Psest_1007	0.46	+1.7
1,092,532	-		Psest_1007	0.46	-2.2
1,092,532	-		Psest_1007	0.46	+1.0
1,092,532	-		Psest_1007	0.46	+1.3
1,092,559	+		Psest_1007	0.49	+0.1
1,092,559	+		Psest_1007	0.49	+3.0
1,092,559	+		Psest_1007	0.49	-0.7
1,092,560	-		Psest_1007	0.50	-0.6
1,092,560	-		Psest_1007	0.50	+1.8
1,093,023	-				-0.6
1,093,023	-				-1.3
1,093,023	-				-0.5
1,093,198	-		Psest_1008	0.88	-1.2
1,094,126	-				-2.3
1,094,226	+				-0.5
1,094,226	+				-1.7
1,094,226	+				-2.7
1,094,226	+				+1.9
1,094,227	-		Psest_1010	0.10	-0.4
1,094,227	-		Psest_1010	0.10	+0.7
1,094,227	-		Psest_1010	0.10	+1.9
1,094,264	+		Psest_1010	0.14	+0.7
1,094,264	+		Psest_1010	0.14	-0.4
1,094,265	-		Psest_1010	0.14	+1.1
1,094,306	+		Psest_1010	0.18	-0.3
1,094,306	+		Psest_1010	0.18	-1.2
1,094,306	+		Psest_1010	0.18	+0.5
1,094,307	-		Psest_1010	0.19	+1.8
1,094,307	-		Psest_1010	0.19	-0.9
1,094,307	-		Psest_1010	0.19	+0.2
1,094,307	-		Psest_1010	0.19	-0.8
1,094,310	-		Psest_1010	0.19	-0.8
1,094,376	-		Psest_1010	0.26	+0.2
1,094,386	-		Psest_1010	0.27	-0.5
1,094,418	+		Psest_1010	0.30	+0.7
1,094,418	+		Psest_1010	0.30	-2.0
1,094,418	+		Psest_1010	0.30	-0.9
1,094,418	+		Psest_1010	0.30	+0.4
1,094,418	+		Psest_1010	0.30	-0.8
1,094,419	-		Psest_1010	0.30	-0.7
1,094,419	-		Psest_1010	0.30	-0.2
1,094,419	-		Psest_1010	0.30	+0.9
1,094,553	+		Psest_1010	0.45	-0.9
1,094,553	+		Psest_1010	0.45	-2.3
1,094,553	+		Psest_1010	0.45	+0.2
1,094,553	+		Psest_1010	0.45	+0.7
1,094,553	+		Psest_1010	0.45	-0.9
1,094,553	+		Psest_1010	0.45	-2.0
1,094,554	-		Psest_1010	0.45	-0.3
1,094,731	+		Psest_1010	0.63	-2.0
1,094,740	+		Psest_1010	0.64	+2.1
1,094,811	+		Psest_1010	0.72	+0.6
1,094,811	+		Psest_1010	0.72	-0.6
1,094,811	+		Psest_1010	0.72	+0.7
1,094,811	+		Psest_1010	0.72	+0.3
1,094,812	-		Psest_1010	0.72	-0.3
1,094,812	-		Psest_1010	0.72	+2.5
1,094,812	-		Psest_1010	0.72	+1.8
1,094,812	-		Psest_1010	0.72	-1.3
1,094,812	-		Psest_1010	0.72	-0.8
1,094,904	+		Psest_1010	0.82	-0.6
1,094,988	+				+1.6
1,094,989	-				+0.1
1,094,989	-				+2.0
1,094,989	-				+0.8
1,095,005	+				-1.9
1,095,015	-				-1.5