Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4372

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,567,817	+				-0.0
4,567,818	-				-2.1
4,567,818	-				-0.8
4,567,818	-				-2.4
4,567,954	-				-1.8
4,568,005	-		Psest_4370	0.17	-0.9
4,568,270	+		Psest_4370	0.86	-0.9
4,568,270	+		Psest_4370	0.86	-1.2
4,568,270	+		Psest_4370	0.86	+1.2
4,568,271	-		Psest_4370	0.86	-2.4
4,568,271	-		Psest_4370	0.86	-0.1
4,568,322	+				-1.0
4,568,322	+				+1.1
4,568,323	-				-0.6
4,568,383	+		Psest_4371	0.14	+0.8
4,568,384	-		Psest_4371	0.15	-0.0
4,568,384	-		Psest_4371	0.15	-1.2
4,568,659	+		Psest_4371	0.83	-0.7
4,568,660	-		Psest_4371	0.83	-0.0
4,568,874	+				-1.9
4,568,874	+				-0.9
4,568,875	-				+1.9
4,568,889	+				-0.0
4,568,889	+				+0.2
4,568,889	+				+0.1
4,568,890	-				+0.0
4,569,174	-		Psest_4372	0.20	-1.3
4,569,342	+		Psest_4372	0.27	+1.3
4,569,343	-		Psest_4372	0.27	+2.7
4,569,471	+		Psest_4372	0.32	-1.3
4,569,548	-		Psest_4372	0.36	-1.2
4,569,583	+		Psest_4372	0.37	-0.3
4,569,583	+		Psest_4372	0.37	-0.0
4,569,583	+		Psest_4372	0.37	+1.1
4,569,583	+		Psest_4372	0.37	-0.8
4,569,583	+		Psest_4372	0.37	-3.6
4,569,583	+		Psest_4372	0.37	+0.7
4,569,584	-		Psest_4372	0.37	-1.4
4,569,584	-		Psest_4372	0.37	+0.2
4,569,584	-		Psest_4372	0.37	-1.4
4,569,584	-		Psest_4372	0.37	-0.1
4,569,690	+		Psest_4372	0.42	-0.7
4,569,690	+		Psest_4372	0.42	-0.1
4,569,741	+		Psest_4372	0.44	-0.7
4,569,742	-		Psest_4372	0.44	-2.4
4,569,745	-		Psest_4372	0.44	-1.8
4,569,855	+		Psest_4372	0.49	+0.6
4,569,855	+		Psest_4372	0.49	+0.0
4,569,856	-		Psest_4372	0.49	+0.4
4,569,856	-		Psest_4372	0.49	-1.2
4,569,856	-		Psest_4372	0.49	-2.1
4,569,856	-		Psest_4372	0.49	+0.0
4,570,029	+		Psest_4372	0.57	+0.5
4,570,029	+		Psest_4372	0.57	-0.3
4,570,030	-		Psest_4372	0.57	+0.7
4,570,030	-		Psest_4372	0.57	-0.2
4,570,030	-		Psest_4372	0.57	-3.1
4,570,269	+		Psest_4372	0.67	-2.1
4,570,269	+		Psest_4372	0.67	+1.7
4,570,269	+		Psest_4372	0.67	+0.1
4,570,269	+		Psest_4372	0.67	+0.8
4,570,269	+		Psest_4372	0.67	-1.4
4,570,269	+		Psest_4372	0.67	+1.8
4,570,270	-		Psest_4372	0.67	-0.4
4,570,270	-		Psest_4372	0.67	-0.2
4,570,270	-		Psest_4372	0.67	+0.1
4,570,270	-		Psest_4372	0.67	+0.9
4,570,270	-		Psest_4372	0.67	-0.7
4,570,474	+		Psest_4372	0.76	-0.7
4,570,474	+		Psest_4372	0.76	+1.3
4,570,474	+		Psest_4372	0.76	-1.2
4,570,475	-		Psest_4372	0.76	+0.8
4,570,475	-		Psest_4372	0.76	-1.5
4,570,475	-		Psest_4372	0.76	-1.5
4,570,478	+		Psest_4372	0.76	-2.6
4,570,479	-		Psest_4372	0.76	-0.2
4,570,479	-		Psest_4372	0.76	-1.0
4,570,479	-		Psest_4372	0.76	+1.0
4,570,743	+		Psest_4372	0.87	-0.9
4,570,744	-		Psest_4372	0.87	+0.4
4,570,756	-		Psest_4372	0.88	+1.3
4,570,756	-		Psest_4372	0.88	-1.2
4,570,756	-		Psest_4372	0.88	-1.2
4,570,969	+				+1.1
4,570,970	-				-1.5
4,571,018	+				-2.4
4,571,019	-				-1.1
4,571,090	+				+1.3
4,571,091	-				+1.4
4,571,091	-				-0.8
4,571,091	-				+1.4
4,571,091	-				-0.8
4,571,124	+				+1.1
4,571,124	+				-0.7
4,571,124	+				-2.7
4,571,124	+				+0.2
4,571,124	+				-1.1
4,571,125	-				+0.1
4,571,125	-				+0.4
4,571,125	-				-0.4
4,571,308	+				+1.2
4,571,309	-				+1.2
4,571,309	-				+1.1
4,571,309	-				-1.2
4,571,309	-				+0.4
4,571,309	-				+0.6