Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4316

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,515,116	+		Psest_4314	0.82	-0.4
4,515,116	+		Psest_4314	0.82	-2.2
4,515,116	+		Psest_4314	0.82	-1.4
4,515,116	+		Psest_4314	0.82	-1.2
4,515,116	+		Psest_4314	0.82	-1.6
4,515,116	+		Psest_4314	0.82	+1.2
4,515,117	-		Psest_4314	0.82	-3.3
4,515,117	-		Psest_4314	0.82	-2.0
4,515,117	-		Psest_4314	0.82	+1.5
4,515,117	-		Psest_4314	0.82	+0.3
4,515,117	-		Psest_4314	0.82	-2.8
4,515,117	-		Psest_4314	0.82	-0.5
4,515,117	-		Psest_4314	0.82	-2.4
4,515,161	+		Psest_4314	0.86	-2.7
4,515,162	-		Psest_4314	0.86	-1.4
4,515,207	-				-2.2
4,515,315	+				-1.2
4,515,315	+				+0.2
4,515,316	-				-1.4
4,515,481	+		Psest_4315	0.27	-1.5
4,515,481	+		Psest_4315	0.27	-1.7
4,515,668	+		Psest_4315	0.54	-2.9
4,515,668	+		Psest_4315	0.54	-2.7
4,515,668	+		Psest_4315	0.54	+0.2
4,515,802	+		Psest_4315	0.74	+0.8
4,515,803	-		Psest_4315	0.74	-2.4
4,515,803	-		Psest_4315	0.74	-3.4
4,515,976	+				-1.2
4,515,976	+				+0.5
4,516,202	+		Psest_4316	0.21	-2.8
4,516,202	+		Psest_4316	0.21	-2.4
4,516,203	-		Psest_4316	0.22	+0.2
4,516,203	-		Psest_4316	0.22	+2.8
4,516,268	+		Psest_4316	0.30	-2.3
4,516,346	+		Psest_4316	0.40	-2.6
4,516,346	+		Psest_4316	0.40	-3.3
4,516,604	+		Psest_4316	0.74	-3.2
4,516,604	+		Psest_4316	0.74	-1.4
4,516,605	-		Psest_4316	0.74	-1.7
4,516,778	+				-2.8
4,516,779	-				-3.3
4,516,871	+				-0.2
4,516,872	-				-1.2
4,516,910	+				+0.4
4,516,987	+				+0.5
4,517,006	+				-1.5
4,517,006	+				+1.3
4,517,007	-				+0.8
4,517,007	-				+0.7
4,517,010	+				+1.1
4,517,010	+				+0.5
4,517,010	+				-1.5
4,517,010	+				+2.8
4,517,010	+				-1.8
4,517,011	-				-1.8
4,517,029	+				-0.3
4,517,029	+				+1.2
4,517,029	+				-0.8
4,517,029	+				+0.7
4,517,029	+				+2.8
4,517,029	+				-0.9
4,517,029	+				+0.1
4,517,029	+				+1.8
4,517,029	+				+2.1
4,517,029	+				-0.5
4,517,029	+				+0.7
4,517,029	+				+0.4
4,517,029	+				+2.0
4,517,030	-				-1.7
4,517,030	-				+1.2
4,517,030	-				-1.7
4,517,030	-				+1.2
4,517,030	-				+0.4
4,517,030	-				-1.3
4,517,030	-				+0.8
4,517,030	-				+2.3
4,517,030	-				-1.7
4,517,030	-				-0.8
4,517,030	-				-0.7
4,517,030	-				+0.8
4,517,030	-				+0.0
4,517,081	+				+1.3
4,517,082	-				-1.4
4,517,082	-				-2.4
4,517,082	-				-0.6
4,517,106	+				+1.1
4,517,106	+				-0.1
4,517,107	-				-2.3
4,517,107	-				-0.4
4,517,140	+				-0.9
4,517,140	+				+1.1
4,517,140	+				-0.4
4,517,140	+				-0.7
4,517,141	-				+1.0
4,517,141	-				+1.0
4,517,141	-				+2.5
4,517,141	-				-0.1
4,517,141	-				-1.4
4,517,141	-				-0.8
4,517,141	-				-2.1
4,517,141	-				-0.4
4,517,359	-		Psest_4317	0.20	+2.5
4,517,374	+		Psest_4317	0.22	+0.7
4,517,463	+		Psest_4317	0.31	+0.6
4,517,463	+		Psest_4317	0.31	+0.3
4,517,463	+		Psest_4317	0.31	+1.2
4,517,463	+		Psest_4317	0.31	-0.3
4,517,463	+		Psest_4317	0.31	+0.1
4,517,463	+		Psest_4317	0.31	-0.8
4,517,463	+		Psest_4317	0.31	+0.2
4,517,463	+		Psest_4317	0.31	+1.4
4,517,463	+		Psest_4317	0.31	-0.5
4,517,463	+		Psest_4317	0.31	+1.2
4,517,464	-		Psest_4317	0.31	-0.2
4,517,464	-		Psest_4317	0.31	-0.1
4,517,464	-		Psest_4317	0.31	-0.4
4,517,464	-		Psest_4317	0.31	+1.9
4,517,464	-		Psest_4317	0.31	-1.0
4,517,464	-		Psest_4317	0.31	+0.2
4,517,464	-		Psest_4317	0.31	-1.0
4,517,464	-		Psest_4317	0.31	+3.7
4,517,464	-		Psest_4317	0.31	+1.2
4,517,464	-		Psest_4317	0.31	-0.6
4,517,581	-		Psest_4317	0.43	-0.8
4,517,620	+		Psest_4317	0.47	+0.4
4,517,621	-		Psest_4317	0.47	+0.4
4,517,643	+		Psest_4317	0.49	-2.1
4,517,644	-		Psest_4317	0.49	+0.4
4,517,781	+		Psest_4317	0.63	+0.6
4,517,781	+		Psest_4317	0.63	-0.7
4,517,781	+		Psest_4317	0.63	+1.1
4,517,782	-		Psest_4317	0.63	-1.2
4,517,782	-		Psest_4317	0.63	-0.4