Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4222

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,401,865	+		Psest_4221	0.66	+1.2
4,401,866	-		Psest_4221	0.66	-2.1
4,401,866	-		Psest_4221	0.66	+0.5
4,401,866	-		Psest_4221	0.66	-0.5
4,401,893	-		Psest_4221	0.69	+1.0
4,401,979	+		Psest_4221	0.78	+1.2
4,402,172	+				+1.2
4,402,173	-				-1.4
4,402,173	-				-1.6
4,402,280	+				+1.8
4,402,280	+				+0.1
4,402,280	+				+2.0
4,402,281	-				-0.5
4,402,281	-				+0.2
4,402,409	+				-1.3
4,402,443	+				+0.1
4,402,443	+				+1.4
4,402,443	+				+1.7
4,402,443	+				+2.2
4,402,443	+				-0.1
4,402,444	-				+0.5
4,402,444	-				-1.5
4,402,444	-				+0.8
4,402,444	-				-0.2
4,402,444	-				+0.7
4,402,444	-				-0.6
4,402,444	-				-0.1
4,402,444	-				-1.0
4,402,444	-				+1.1
4,402,500	+				+3.3
4,402,500	+				-0.3
4,402,500	+				-0.7
4,402,501	-				+2.4
4,402,501	-				+0.6
4,402,501	-				+1.2
4,402,617	-		Psest_4222	0.14	+0.1
4,402,659	+		Psest_4222	0.17	-0.1
4,402,760	+		Psest_4222	0.24	+0.7
4,402,760	+		Psest_4222	0.24	+2.6
4,402,760	+		Psest_4222	0.24	+3.5
4,402,760	+		Psest_4222	0.24	+0.2
4,402,760	+		Psest_4222	0.24	+0.1
4,402,760	+		Psest_4222	0.24	+1.8
4,402,761	-		Psest_4222	0.24	-1.2
4,402,761	-		Psest_4222	0.24	+1.8
4,402,761	-		Psest_4222	0.24	+0.5
4,402,761	-		Psest_4222	0.24	+3.0
4,402,777	-		Psest_4222	0.25	+1.0
4,402,777	-		Psest_4222	0.25	-0.2
4,402,777	-		Psest_4222	0.25	+0.7
4,402,823	+		Psest_4222	0.29	-0.2
4,402,823	+		Psest_4222	0.29	-0.5
4,402,823	+		Psest_4222	0.29	+1.4
4,402,823	+		Psest_4222	0.29	+3.0
4,402,824	-		Psest_4222	0.29	-1.5
4,402,824	-		Psest_4222	0.29	+1.0
4,402,824	-		Psest_4222	0.29	+0.4
4,402,824	-		Psest_4222	0.29	+1.8
4,402,824	-		Psest_4222	0.29	+0.9
4,402,824	-		Psest_4222	0.29	+2.8
4,402,922	+		Psest_4222	0.36	+0.9
4,402,922	+		Psest_4222	0.36	+0.0
4,402,922	+		Psest_4222	0.36	+0.8
4,402,922	+		Psest_4222	0.36	+0.4
4,402,922	+		Psest_4222	0.36	+1.2
4,402,922	+		Psest_4222	0.36	+3.8
4,402,922	+		Psest_4222	0.36	+1.1
4,402,922	+		Psest_4222	0.36	+2.2
4,402,922	+		Psest_4222	0.36	+0.8
4,402,922	+		Psest_4222	0.36	-0.9
4,402,922	+		Psest_4222	0.36	+2.1
4,402,922	+		Psest_4222	0.36	-0.3
4,402,923	-		Psest_4222	0.36	+5.2
4,402,923	-		Psest_4222	0.36	+2.8
4,402,923	-		Psest_4222	0.36	+0.9
4,402,923	-		Psest_4222	0.36	+1.2
4,402,923	-		Psest_4222	0.36	-0.0
4,402,923	-		Psest_4222	0.36	+0.8
4,402,928	+		Psest_4222	0.36	+0.9
4,402,929	-		Psest_4222	0.37	+2.0
4,402,929	-		Psest_4222	0.37	+1.5
4,403,315	+		Psest_4222	0.65	+0.9
4,403,315	+		Psest_4222	0.65	+2.2
4,403,315	+		Psest_4222	0.65	+1.5
4,403,316	-		Psest_4222	0.65	+1.0
4,403,316	-		Psest_4222	0.65	+0.2
4,403,316	-		Psest_4222	0.65	-0.2
4,403,316	-		Psest_4222	0.65	+1.8
4,403,316	-		Psest_4222	0.65	+1.5
4,403,771	+				-1.9
4,403,838	-				+0.8
4,403,949	+		Psest_4223	0.12	-0.2
4,403,949	+		Psest_4223	0.12	+1.0
4,403,950	-		Psest_4223	0.13	-0.4
4,403,950	-		Psest_4223	0.13	+0.7
4,403,950	-		Psest_4223	0.13	+0.8
4,403,982	+		Psest_4223	0.16	+1.4
4,403,982	+		Psest_4223	0.16	+0.2
4,403,983	-		Psest_4223	0.16	+0.0
4,404,143	+		Psest_4223	0.35	+1.0
4,404,144	-		Psest_4223	0.35	-1.8
4,404,144	-		Psest_4223	0.35	-0.3
4,404,144	-		Psest_4223	0.35	-1.4
4,404,453	+		Psest_4223	0.70	+1.8
4,404,453	+		Psest_4223	0.70	+0.4
4,404,454	-		Psest_4223	0.70	-1.9
4,404,454	-		Psest_4223	0.70	+0.7
4,404,454	-		Psest_4223	0.70	+0.2
4,404,535	+		Psest_4223	0.80	+0.3
4,404,535	+		Psest_4223	0.80	+0.8
4,404,535	+		Psest_4223	0.80	+0.2
4,404,540	+		Psest_4223	0.80	+2.2
4,404,721	-				+0.2
4,404,721	-				-0.8