Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4221 and Psest_4222 are separated by 238 nucleotides Psest_4222 and Psest_4223 are separated by 39 nucleotides
Psest_4221: Psest_4221 - homoserine kinase, Neisseria type, at 4,401,235 to 4,402,188
_4221
Psest_4222: Psest_4222 - Predicted Rossmann fold nucleotide-binding protein, at 4,402,427 to 4,403,800
_4222
Psest_4223: Psest_4223 - Predicted membrane-associated, metal-dependent hydrolase, at 4,403,840 to 4,404,712
_4223
Position (kb)
4402
4403
4404 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 4401.865 kb on + strand, within Psest_4221 at 4401.866 kb on - strand, within Psest_4221 at 4401.866 kb on - strand, within Psest_4221 at 4401.866 kb on - strand, within Psest_4221 at 4401.893 kb on - strand, within Psest_4221 at 4401.979 kb on + strand, within Psest_4221 at 4402.172 kb on + strand at 4402.173 kb on - strand at 4402.173 kb on - strand at 4402.280 kb on + strand at 4402.280 kb on + strand at 4402.280 kb on + strand at 4402.281 kb on - strand at 4402.281 kb on - strand at 4402.409 kb on + strand at 4402.443 kb on + strand at 4402.443 kb on + strand at 4402.443 kb on + strand at 4402.443 kb on + strand at 4402.443 kb on + strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.444 kb on - strand at 4402.500 kb on + strand at 4402.500 kb on + strand at 4402.500 kb on + strand at 4402.501 kb on - strand at 4402.501 kb on - strand at 4402.501 kb on - strand at 4402.617 kb on - strand, within Psest_4222 at 4402.659 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.760 kb on + strand, within Psest_4222 at 4402.761 kb on - strand, within Psest_4222 at 4402.761 kb on - strand, within Psest_4222 at 4402.761 kb on - strand, within Psest_4222 at 4402.761 kb on - strand, within Psest_4222 at 4402.777 kb on - strand, within Psest_4222 at 4402.777 kb on - strand, within Psest_4222 at 4402.777 kb on - strand, within Psest_4222 at 4402.823 kb on + strand, within Psest_4222 at 4402.823 kb on + strand, within Psest_4222 at 4402.823 kb on + strand, within Psest_4222 at 4402.823 kb on + strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.824 kb on - strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.922 kb on + strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.923 kb on - strand, within Psest_4222 at 4402.928 kb on + strand, within Psest_4222 at 4402.929 kb on - strand, within Psest_4222 at 4402.929 kb on - strand, within Psest_4222 at 4403.315 kb on + strand, within Psest_4222 at 4403.315 kb on + strand, within Psest_4222 at 4403.315 kb on + strand, within Psest_4222 at 4403.316 kb on - strand, within Psest_4222 at 4403.316 kb on - strand, within Psest_4222 at 4403.316 kb on - strand, within Psest_4222 at 4403.316 kb on - strand, within Psest_4222 at 4403.316 kb on - strand, within Psest_4222 at 4403.771 kb on + strand at 4403.838 kb on - strand at 4403.949 kb on + strand, within Psest_4223 at 4403.949 kb on + strand, within Psest_4223 at 4403.950 kb on - strand, within Psest_4223 at 4403.950 kb on - strand, within Psest_4223 at 4403.950 kb on - strand, within Psest_4223 at 4403.982 kb on + strand, within Psest_4223 at 4403.982 kb on + strand, within Psest_4223 at 4403.983 kb on - strand, within Psest_4223 at 4404.143 kb on + strand, within Psest_4223 at 4404.144 kb on - strand, within Psest_4223 at 4404.144 kb on - strand, within Psest_4223 at 4404.144 kb on - strand, within Psest_4223 at 4404.453 kb on + strand, within Psest_4223 at 4404.453 kb on + strand, within Psest_4223 at 4404.454 kb on - strand, within Psest_4223 at 4404.454 kb on - strand, within Psest_4223 at 4404.454 kb on - strand, within Psest_4223 at 4404.535 kb on + strand, within Psest_4223 at 4404.535 kb on + strand, within Psest_4223 at 4404.535 kb on + strand, within Psest_4223 at 4404.540 kb on + strand, within Psest_4223 at 4404.721 kb on - strand at 4404.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 4,401,865 + Psest_4221 0.66 +1.2 4,401,866 - Psest_4221 0.66 -2.1 4,401,866 - Psest_4221 0.66 +0.5 4,401,866 - Psest_4221 0.66 -0.5 4,401,893 - Psest_4221 0.69 +1.0 4,401,979 + Psest_4221 0.78 +1.2 4,402,172 + +1.2 4,402,173 - -1.4 4,402,173 - -1.6 4,402,280 + +1.8 4,402,280 + +0.1 4,402,280 + +2.0 4,402,281 - -0.5 4,402,281 - +0.2 4,402,409 + -1.3 4,402,443 + +0.1 4,402,443 + +1.4 4,402,443 + +1.7 4,402,443 + +2.2 4,402,443 + -0.1 4,402,444 - +0.5 4,402,444 - -1.5 4,402,444 - +0.8 4,402,444 - -0.2 4,402,444 - +0.7 4,402,444 - -0.6 4,402,444 - -0.1 4,402,444 - -1.0 4,402,444 - +1.1 4,402,500 + +3.3 4,402,500 + -0.3 4,402,500 + -0.7 4,402,501 - +2.4 4,402,501 - +0.6 4,402,501 - +1.2 4,402,617 - Psest_4222 0.14 +0.1 4,402,659 + Psest_4222 0.17 -0.1 4,402,760 + Psest_4222 0.24 +0.7 4,402,760 + Psest_4222 0.24 +2.6 4,402,760 + Psest_4222 0.24 +3.5 4,402,760 + Psest_4222 0.24 +0.2 4,402,760 + Psest_4222 0.24 +0.1 4,402,760 + Psest_4222 0.24 +1.8 4,402,761 - Psest_4222 0.24 -1.2 4,402,761 - Psest_4222 0.24 +1.8 4,402,761 - Psest_4222 0.24 +0.5 4,402,761 - Psest_4222 0.24 +3.0 4,402,777 - Psest_4222 0.25 +1.0 4,402,777 - Psest_4222 0.25 -0.2 4,402,777 - Psest_4222 0.25 +0.7 4,402,823 + Psest_4222 0.29 -0.2 4,402,823 + Psest_4222 0.29 -0.5 4,402,823 + Psest_4222 0.29 +1.4 4,402,823 + Psest_4222 0.29 +3.0 4,402,824 - Psest_4222 0.29 -1.5 4,402,824 - Psest_4222 0.29 +1.0 4,402,824 - Psest_4222 0.29 +0.4 4,402,824 - Psest_4222 0.29 +1.8 4,402,824 - Psest_4222 0.29 +0.9 4,402,824 - Psest_4222 0.29 +2.8 4,402,922 + Psest_4222 0.36 +0.9 4,402,922 + Psest_4222 0.36 +0.0 4,402,922 + Psest_4222 0.36 +0.8 4,402,922 + Psest_4222 0.36 +0.4 4,402,922 + Psest_4222 0.36 +1.2 4,402,922 + Psest_4222 0.36 +3.8 4,402,922 + Psest_4222 0.36 +1.1 4,402,922 + Psest_4222 0.36 +2.2 4,402,922 + Psest_4222 0.36 +0.8 4,402,922 + Psest_4222 0.36 -0.9 4,402,922 + Psest_4222 0.36 +2.1 4,402,922 + Psest_4222 0.36 -0.3 4,402,923 - Psest_4222 0.36 +5.2 4,402,923 - Psest_4222 0.36 +2.8 4,402,923 - Psest_4222 0.36 +0.9 4,402,923 - Psest_4222 0.36 +1.2 4,402,923 - Psest_4222 0.36 -0.0 4,402,923 - Psest_4222 0.36 +0.8 4,402,928 + Psest_4222 0.36 +0.9 4,402,929 - Psest_4222 0.37 +2.0 4,402,929 - Psest_4222 0.37 +1.5 4,403,315 + Psest_4222 0.65 +0.9 4,403,315 + Psest_4222 0.65 +2.2 4,403,315 + Psest_4222 0.65 +1.5 4,403,316 - Psest_4222 0.65 +1.0 4,403,316 - Psest_4222 0.65 +0.2 4,403,316 - Psest_4222 0.65 -0.2 4,403,316 - Psest_4222 0.65 +1.8 4,403,316 - Psest_4222 0.65 +1.5 4,403,771 + -1.9 4,403,838 - +0.8 4,403,949 + Psest_4223 0.12 -0.2 4,403,949 + Psest_4223 0.12 +1.0 4,403,950 - Psest_4223 0.13 -0.4 4,403,950 - Psest_4223 0.13 +0.7 4,403,950 - Psest_4223 0.13 +0.8 4,403,982 + Psest_4223 0.16 +1.4 4,403,982 + Psest_4223 0.16 +0.2 4,403,983 - Psest_4223 0.16 +0.0 4,404,143 + Psest_4223 0.35 +1.0 4,404,144 - Psest_4223 0.35 -1.8 4,404,144 - Psest_4223 0.35 -0.3 4,404,144 - Psest_4223 0.35 -1.4 4,404,453 + Psest_4223 0.70 +1.8 4,404,453 + Psest_4223 0.70 +0.4 4,404,454 - Psest_4223 0.70 -1.9 4,404,454 - Psest_4223 0.70 +0.7 4,404,454 - Psest_4223 0.70 +0.2 4,404,535 + Psest_4223 0.80 +0.3 4,404,535 + Psest_4223 0.80 +0.8 4,404,535 + Psest_4223 0.80 +0.2 4,404,540 + Psest_4223 0.80 +2.2 4,404,721 - +0.2 4,404,721 - -0.8
Or see this region's nucleotide sequence