Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0370 and Psest_0371 are separated by 10 nucleotides Psest_0371 and Psest_0372 are separated by 67 nucleotides Psest_0372 and Psest_0373 are separated by 28 nucleotides
Psest_0370: Psest_0370 - Uncharacterized protein conserved in bacteria, at 396,146 to 397,666
_0370
Psest_0371: Psest_0371 - hypothetical protein, at 397,677 to 398,171
_0371
Psest_0372: Psest_0372 - Uncharacterized protein conserved in bacteria, at 398,239 to 399,219
_0372
Psest_0373: Psest_0373 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 399,248 to 400,639
_0373
Position (kb) 398
399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 397.460 kb on - strand, within Psest_0370 at 397.655 kb on + strand at 397.655 kb on + strand at 397.655 kb on + strand at 397.655 kb on + strand at 397.656 kb on - strand at 397.656 kb on - strand at 397.738 kb on + strand, within Psest_0371 at 397.738 kb on + strand, within Psest_0371 at 397.738 kb on + strand, within Psest_0371 at 397.738 kb on + strand, within Psest_0371 at 397.738 kb on + strand, within Psest_0371 at 397.738 kb on + strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.739 kb on - strand, within Psest_0371 at 397.828 kb on + strand, within Psest_0371 at 397.828 kb on + strand, within Psest_0371 at 397.829 kb on - strand, within Psest_0371 at 397.829 kb on - strand, within Psest_0371 at 397.834 kb on + strand, within Psest_0371 at 397.834 kb on + strand, within Psest_0371 at 397.834 kb on + strand, within Psest_0371 at 397.835 kb on - strand, within Psest_0371 at 397.835 kb on - strand, within Psest_0371 at 397.835 kb on - strand, within Psest_0371 at 397.882 kb on + strand, within Psest_0371 at 397.882 kb on + strand, within Psest_0371 at 397.882 kb on + strand, within Psest_0371 at 397.883 kb on - strand, within Psest_0371 at 397.883 kb on - strand, within Psest_0371 at 397.883 kb on - strand, within Psest_0371 at 397.968 kb on + strand, within Psest_0371 at 398.085 kb on + strand, within Psest_0371 at 398.086 kb on - strand, within Psest_0371 at 398.107 kb on + strand, within Psest_0371 at 398.107 kb on + strand, within Psest_0371 at 398.107 kb on + strand, within Psest_0371 at 398.108 kb on - strand, within Psest_0371 at 398.108 kb on - strand, within Psest_0371 at 398.134 kb on - strand at 398.134 kb on - strand at 398.240 kb on + strand at 398.240 kb on + strand at 398.241 kb on - strand at 398.241 kb on - strand at 398.241 kb on - strand at 398.327 kb on + strand at 398.328 kb on - strand at 398.330 kb on + strand at 398.369 kb on + strand, within Psest_0372 at 398.456 kb on + strand, within Psest_0372 at 398.456 kb on + strand, within Psest_0372 at 398.457 kb on - strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.573 kb on + strand, within Psest_0372 at 398.574 kb on - strand, within Psest_0372 at 398.574 kb on - strand, within Psest_0372 at 398.574 kb on - strand, within Psest_0372 at 398.574 kb on - strand, within Psest_0372 at 398.574 kb on - strand, within Psest_0372 at 398.591 kb on + strand, within Psest_0372 at 398.591 kb on + strand, within Psest_0372 at 398.591 kb on + strand, within Psest_0372 at 398.592 kb on - strand, within Psest_0372 at 398.592 kb on - strand, within Psest_0372 at 398.741 kb on + strand, within Psest_0372 at 398.741 kb on + strand, within Psest_0372 at 398.873 kb on + strand, within Psest_0372 at 398.873 kb on + strand, within Psest_0372 at 399.004 kb on - strand, within Psest_0372 at 399.044 kb on + strand, within Psest_0372 at 399.044 kb on + strand, within Psest_0372 at 399.044 kb on + strand, within Psest_0372 at 399.045 kb on - strand, within Psest_0372 at 399.045 kb on - strand, within Psest_0372 at 399.045 kb on - strand, within Psest_0372 at 399.208 kb on + strand at 399.208 kb on + strand at 399.208 kb on + strand at 399.208 kb on + strand at 399.254 kb on - strand at 399.254 kb on - strand at 399.285 kb on + strand at 399.285 kb on + strand at 399.286 kb on - strand at 399.286 kb on - strand at 399.286 kb on - strand at 399.286 kb on - strand at 399.286 kb on - strand at 399.286 kb on - strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.354 kb on + strand at 399.789 kb on + strand, within Psest_0373 at 400.099 kb on - strand, within Psest_0373 at 400.099 kb on - strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.127 kb on + strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.128 kb on - strand, within Psest_0373 at 400.129 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.131 kb on + strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.132 kb on - strand, within Psest_0373 at 400.140 kb on + strand, within Psest_0373
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 397,460 - Psest_0370 0.86 +1.3 397,655 + +1.6 397,655 + +2.8 397,655 + +2.4 397,655 + +0.7 397,656 - -1.2 397,656 - +1.2 397,738 + Psest_0371 0.12 +0.6 397,738 + Psest_0371 0.12 +0.4 397,738 + Psest_0371 0.12 +0.6 397,738 + Psest_0371 0.12 -2.0 397,738 + Psest_0371 0.12 -1.4 397,738 + Psest_0371 0.12 +1.1 397,739 - Psest_0371 0.13 -0.0 397,739 - Psest_0371 0.13 +1.8 397,739 - Psest_0371 0.13 -0.4 397,739 - Psest_0371 0.13 -1.0 397,739 - Psest_0371 0.13 +0.1 397,739 - Psest_0371 0.13 -0.6 397,739 - Psest_0371 0.13 +0.1 397,739 - Psest_0371 0.13 +0.4 397,739 - Psest_0371 0.13 +0.8 397,739 - Psest_0371 0.13 -3.1 397,739 - Psest_0371 0.13 +0.0 397,739 - Psest_0371 0.13 +0.8 397,739 - Psest_0371 0.13 -0.8 397,828 + Psest_0371 0.31 -0.4 397,828 + Psest_0371 0.31 -0.5 397,829 - Psest_0371 0.31 -2.3 397,829 - Psest_0371 0.31 -2.9 397,834 + Psest_0371 0.32 +1.5 397,834 + Psest_0371 0.32 +0.9 397,834 + Psest_0371 0.32 -0.8 397,835 - Psest_0371 0.32 +1.6 397,835 - Psest_0371 0.32 -0.2 397,835 - Psest_0371 0.32 -0.6 397,882 + Psest_0371 0.41 -0.5 397,882 + Psest_0371 0.41 -0.5 397,882 + Psest_0371 0.41 +0.9 397,883 - Psest_0371 0.42 -2.0 397,883 - Psest_0371 0.42 -2.3 397,883 - Psest_0371 0.42 -0.2 397,968 + Psest_0371 0.59 -1.9 398,085 + Psest_0371 0.82 -1.9 398,086 - Psest_0371 0.83 +0.6 398,107 + Psest_0371 0.87 -2.8 398,107 + Psest_0371 0.87 +0.3 398,107 + Psest_0371 0.87 -0.9 398,108 - Psest_0371 0.87 -1.8 398,108 - Psest_0371 0.87 +1.0 398,134 - +0.0 398,134 - -1.9 398,240 + -0.5 398,240 + +1.6 398,241 - -2.1 398,241 - +0.6 398,241 - -0.1 398,327 + +1.1 398,328 - +1.2 398,330 + -0.1 398,369 + Psest_0372 0.13 +1.2 398,456 + Psest_0372 0.22 +1.8 398,456 + Psest_0372 0.22 -0.3 398,457 - Psest_0372 0.22 -1.0 398,573 + Psest_0372 0.34 +1.3 398,573 + Psest_0372 0.34 +5.3 398,573 + Psest_0372 0.34 +0.6 398,573 + Psest_0372 0.34 +0.8 398,573 + Psest_0372 0.34 -0.6 398,573 + Psest_0372 0.34 -0.9 398,574 - Psest_0372 0.34 +2.3 398,574 - Psest_0372 0.34 +0.9 398,574 - Psest_0372 0.34 +1.2 398,574 - Psest_0372 0.34 +2.1 398,574 - Psest_0372 0.34 +0.8 398,591 + Psest_0372 0.36 +0.6 398,591 + Psest_0372 0.36 -1.8 398,591 + Psest_0372 0.36 -2.4 398,592 - Psest_0372 0.36 +1.6 398,592 - Psest_0372 0.36 +0.9 398,741 + Psest_0372 0.51 +0.2 398,741 + Psest_0372 0.51 -0.1 398,873 + Psest_0372 0.65 +2.1 398,873 + Psest_0372 0.65 -0.3 399,004 - Psest_0372 0.78 +1.4 399,044 + Psest_0372 0.82 -2.8 399,044 + Psest_0372 0.82 +1.6 399,044 + Psest_0372 0.82 +0.8 399,045 - Psest_0372 0.82 +2.2 399,045 - Psest_0372 0.82 -1.2 399,045 - Psest_0372 0.82 -1.2 399,208 + +2.1 399,208 + -1.3 399,208 + +0.2 399,208 + -0.2 399,254 - -2.3 399,254 - +1.8 399,285 + +0.4 399,285 + +0.7 399,286 - +1.4 399,286 - -0.6 399,286 - -0.8 399,286 - -1.7 399,286 - -1.3 399,286 - -1.8 399,354 + +1.3 399,354 + -1.1 399,354 + -1.7 399,354 + -1.8 399,354 + -0.1 399,354 + -0.3 399,354 + +3.0 399,789 + Psest_0373 0.39 +0.5 400,099 - Psest_0373 0.61 +0.1 400,099 - Psest_0373 0.61 +1.0 400,127 + Psest_0373 0.63 +0.7 400,127 + Psest_0373 0.63 +1.1 400,127 + Psest_0373 0.63 +1.7 400,127 + Psest_0373 0.63 +1.1 400,127 + Psest_0373 0.63 +1.8 400,127 + Psest_0373 0.63 -0.6 400,127 + Psest_0373 0.63 -0.8 400,127 + Psest_0373 0.63 +0.6 400,127 + Psest_0373 0.63 +0.5 400,127 + Psest_0373 0.63 -0.8 400,127 + Psest_0373 0.63 -1.2 400,127 + Psest_0373 0.63 -0.1 400,127 + Psest_0373 0.63 +0.5 400,127 + Psest_0373 0.63 -0.4 400,127 + Psest_0373 0.63 +1.1 400,128 - Psest_0373 0.63 -1.3 400,128 - Psest_0373 0.63 +0.9 400,128 - Psest_0373 0.63 +0.2 400,128 - Psest_0373 0.63 -0.5 400,128 - Psest_0373 0.63 -1.2 400,128 - Psest_0373 0.63 +0.6 400,128 - Psest_0373 0.63 -0.5 400,128 - Psest_0373 0.63 -1.5 400,128 - Psest_0373 0.63 -2.5 400,128 - Psest_0373 0.63 -1.8 400,128 - Psest_0373 0.63 -1.2 400,128 - Psest_0373 0.63 +1.2 400,128 - Psest_0373 0.63 +1.2 400,128 - Psest_0373 0.63 -2.7 400,128 - Psest_0373 0.63 +1.0 400,128 - Psest_0373 0.63 -2.7 400,128 - Psest_0373 0.63 +0.5 400,128 - Psest_0373 0.63 +0.7 400,128 - Psest_0373 0.63 -0.8 400,128 - Psest_0373 0.63 +3.4 400,128 - Psest_0373 0.63 +0.8 400,128 - Psest_0373 0.63 -0.0 400,128 - Psest_0373 0.63 +0.8 400,128 - Psest_0373 0.63 +0.5 400,128 - Psest_0373 0.63 +0.3 400,128 - Psest_0373 0.63 -1.4 400,128 - Psest_0373 0.63 -1.1 400,128 - Psest_0373 0.63 +0.5 400,128 - Psest_0373 0.63 +0.0 400,128 - Psest_0373 0.63 -0.0 400,128 - Psest_0373 0.63 +1.5 400,128 - Psest_0373 0.63 -1.2 400,128 - Psest_0373 0.63 +0.3 400,129 + Psest_0373 0.63 -1.2 400,131 + Psest_0373 0.63 +1.1 400,131 + Psest_0373 0.63 +0.3 400,131 + Psest_0373 0.63 +0.9 400,131 + Psest_0373 0.63 +2.6 400,131 + Psest_0373 0.63 -0.4 400,131 + Psest_0373 0.63 -1.4 400,131 + Psest_0373 0.63 -1.4 400,131 + Psest_0373 0.63 +0.2 400,131 + Psest_0373 0.63 +0.2 400,131 + Psest_0373 0.63 -0.8 400,131 + Psest_0373 0.63 +0.1 400,131 + Psest_0373 0.63 +3.0 400,131 + Psest_0373 0.63 -1.2 400,131 + Psest_0373 0.63 +0.9 400,131 + Psest_0373 0.63 +0.3 400,131 + Psest_0373 0.63 -2.4 400,131 + Psest_0373 0.63 +0.1 400,131 + Psest_0373 0.63 -0.4 400,131 + Psest_0373 0.63 -0.4 400,131 + Psest_0373 0.63 +0.7 400,131 + Psest_0373 0.63 -0.5 400,131 + Psest_0373 0.63 -0.9 400,131 + Psest_0373 0.63 -1.7 400,131 + Psest_0373 0.63 +0.9 400,131 + Psest_0373 0.63 +1.2 400,131 + Psest_0373 0.63 +1.4 400,131 + Psest_0373 0.63 +0.5 400,131 + Psest_0373 0.63 -1.3 400,132 - Psest_0373 0.64 -1.4 400,132 - Psest_0373 0.64 -0.7 400,132 - Psest_0373 0.64 -0.2 400,132 - Psest_0373 0.64 +1.0 400,132 - Psest_0373 0.64 -2.8 400,132 - Psest_0373 0.64 +0.2 400,132 - Psest_0373 0.64 -1.6 400,132 - Psest_0373 0.64 +0.0 400,132 - Psest_0373 0.64 +0.4 400,132 - Psest_0373 0.64 -0.8 400,132 - Psest_0373 0.64 +1.8 400,132 - Psest_0373 0.64 -1.4 400,132 - Psest_0373 0.64 +2.2 400,132 - Psest_0373 0.64 -0.0 400,132 - Psest_0373 0.64 -1.0 400,132 - Psest_0373 0.64 -0.2 400,132 - Psest_0373 0.64 -1.5 400,132 - Psest_0373 0.64 -0.7 400,132 - Psest_0373 0.64 +0.2 400,132 - Psest_0373 0.64 -0.2 400,132 - Psest_0373 0.64 +1.7 400,132 - Psest_0373 0.64 -2.5 400,132 - Psest_0373 0.64 +0.4 400,132 - Psest_0373 0.64 +2.0 400,132 - Psest_0373 0.64 -1.2 400,132 - Psest_0373 0.64 -1.2 400,132 - Psest_0373 0.64 -1.1 400,132 - Psest_0373 0.64 +1.8 400,132 - Psest_0373 0.64 +2.2 400,132 - Psest_0373 0.64 -1.4 400,132 - Psest_0373 0.64 -0.5 400,132 - Psest_0373 0.64 -0.5 400,132 - Psest_0373 0.64 -1.8 400,140 + Psest_0373 0.64 -1.6
Or see this region's nucleotide sequence