Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3722 and Psest_3723 are separated by 20 nucleotides Psest_3723 and Psest_3724 are separated by 196 nucleotides Psest_3724 and Psest_3725 are separated by 112 nucleotides
Psest_3722: Psest_3722 - Micrococcal nuclease (thermonuclease) homologs, at 3,891,887 to 3,892,684
_3722
Psest_3723: Psest_3723 - ribosomal protein L31, at 3,892,705 to 3,892,917
_3723
Psest_3724: Psest_3724 - primosomal protein N', at 3,893,114 to 3,895,336
_3724
Psest_3725: Psest_3725 - arginyl-tRNA synthetase, at 3,895,449 to 3,897,188
_3725
Position (kb)
3893
3894
3895
3896 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3892.332 kb on + strand, within Psest_3722 at 3892.332 kb on + strand, within Psest_3722 at 3892.333 kb on - strand, within Psest_3722 at 3892.489 kb on + strand, within Psest_3722 at 3892.489 kb on + strand, within Psest_3722 at 3892.665 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3892.707 kb on - strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.047 kb on + strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.048 kb on - strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.053 kb on + strand at 3893.054 kb on - strand at 3893.054 kb on - strand at 3893.072 kb on + strand at 3893.072 kb on + strand at 3893.082 kb on + strand at 3893.082 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 3,892,332 + Psest_3722 0.56 -0.7 3,892,332 + Psest_3722 0.56 -0.2 3,892,333 - Psest_3722 0.56 +1.5 3,892,489 + Psest_3722 0.75 +1.7 3,892,489 + Psest_3722 0.75 +1.3 3,892,665 - +0.6 3,892,707 - -0.8 3,892,707 - -1.3 3,892,707 - +2.7 3,892,707 - -0.3 3,892,707 - +0.7 3,893,047 + +1.0 3,893,047 + +2.1 3,893,047 + +1.2 3,893,047 + +2.3 3,893,047 + +1.3 3,893,048 - -0.1 3,893,048 - -0.1 3,893,048 - +1.6 3,893,048 - -2.4 3,893,048 - +1.1 3,893,048 - +0.7 3,893,048 - +2.5 3,893,048 - -1.9 3,893,048 - +1.9 3,893,053 + -1.1 3,893,053 + -0.7 3,893,053 + -0.4 3,893,053 + +0.9 3,893,054 - -2.9 3,893,054 - +0.0 3,893,072 + -0.9 3,893,072 + +2.7 3,893,082 + -2.3 3,893,082 + +0.7
Or see this region's nucleotide sequence