Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1825

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,922,776	+		Psest_1823	0.72	-1.7
1,922,807	+		Psest_1823	0.75	-0.1
1,922,808	-		Psest_1823	0.75	+2.6
1,922,818	+		Psest_1823	0.76	+2.6
1,922,818	+		Psest_1823	0.76	-1.8
1,922,819	-		Psest_1823	0.76	-0.3
1,922,821	+		Psest_1823	0.77	+0.4
1,922,821	+		Psest_1823	0.77	+0.6
1,922,846	+		Psest_1823	0.79	-1.7
1,922,897	+		Psest_1823	0.85	+1.6
1,922,897	+		Psest_1823	0.85	-1.2
1,922,897	+		Psest_1823	0.85	+0.7
1,922,898	-		Psest_1823	0.85	+1.5
1,922,898	-		Psest_1823	0.85	+1.2
1,922,898	-		Psest_1823	0.85	-0.2
1,923,054	-				+2.9
1,923,070	-				-1.2
1,923,128	+		Psest_1824	0.12	+4.9
1,923,216	+		Psest_1824	0.28	+3.4
1,923,217	-		Psest_1824	0.28	+3.2
1,923,528	+		Psest_1824	0.85	+1.9
1,923,528	+		Psest_1824	0.85	+5.6
1,923,550	+		Psest_1824	0.89	+2.0
1,923,550	+		Psest_1824	0.89	-0.6
1,923,550	+		Psest_1824	0.89	+2.0
1,923,551	-		Psest_1824	0.89	+2.5
1,923,559	+				+0.2
1,923,560	-				+3.1
1,923,560	-				+0.2
1,923,567	+				+3.1
1,923,567	+				-0.1
1,923,639	+				-1.9
1,923,640	-				+2.0
1,923,662	+				-0.1
1,923,663	-				+2.3
1,923,699	+				-1.1
1,923,732	+				-0.5
1,923,733	-				+0.9
1,923,818	+				-1.2
1,923,818	+				+3.2
1,923,904	+				+2.2
1,923,993	-		Psest_1825	0.12	+2.0
1,924,085	+		Psest_1825	0.16	-0.5
1,924,156	-		Psest_1825	0.20	+1.2
1,924,190	+		Psest_1825	0.21	-0.6
1,924,190	+		Psest_1825	0.21	+0.4
1,924,191	-		Psest_1825	0.21	+0.8
1,924,191	-		Psest_1825	0.21	+2.5
1,924,225	+		Psest_1825	0.23	+0.8
1,924,225	+		Psest_1825	0.23	+0.9
1,924,225	+		Psest_1825	0.23	+2.1
1,924,225	+		Psest_1825	0.23	+2.4
1,924,225	+		Psest_1825	0.23	-0.6
1,924,226	-		Psest_1825	0.23	+0.5
1,924,269	+		Psest_1825	0.25	-0.6
1,924,269	+		Psest_1825	0.25	+0.6
1,924,269	+		Psest_1825	0.25	+0.3
1,924,269	+		Psest_1825	0.25	+1.4
1,924,269	+		Psest_1825	0.25	+1.4
1,924,270	-		Psest_1825	0.25	+2.4
1,924,270	-		Psest_1825	0.25	-1.2
1,924,271	+		Psest_1825	0.25	+2.6
1,924,397	+		Psest_1825	0.32	-1.6
1,924,527	+		Psest_1825	0.38	-0.1
1,924,527	+		Psest_1825	0.38	-1.2
1,924,528	-		Psest_1825	0.38	+1.2
1,924,528	-		Psest_1825	0.38	+0.4
1,924,528	-		Psest_1825	0.38	+1.5
1,924,657	+		Psest_1825	0.45	+1.7
1,924,657	+		Psest_1825	0.45	+1.6
1,924,733	-		Psest_1825	0.48	+1.8
1,924,792	+		Psest_1825	0.51	-0.1
1,924,820	-		Psest_1825	0.53	+3.5
1,924,917	-		Psest_1825	0.57	-0.1
1,924,931	+		Psest_1825	0.58	+2.0
1,924,931	+		Psest_1825	0.58	+1.2
1,924,931	+		Psest_1825	0.58	-0.6
1,924,931	+		Psest_1825	0.58	+1.3
1,924,932	-		Psest_1825	0.58	+0.3
1,924,945	+		Psest_1825	0.59	+0.7
1,925,255	+		Psest_1825	0.74	+1.7
1,925,255	+		Psest_1825	0.74	+3.0
1,925,256	-		Psest_1825	0.74	+1.5
1,925,312	+		Psest_1825	0.77	+0.4
1,925,312	+		Psest_1825	0.77	-1.9
1,925,488	+		Psest_1825	0.86	+1.7
1,925,501	+		Psest_1825	0.86	+1.5
1,925,531	+		Psest_1825	0.88	+1.1
1,925,532	-		Psest_1825	0.88	+1.3
1,925,532	-		Psest_1825	0.88	-0.8
1,925,541	+		Psest_1825	0.88	-0.6
1,925,542	-		Psest_1825	0.88	+1.8
1,925,619	+				+0.1
1,925,619	+				-0.1
1,925,619	+				+1.5
1,925,619	+				+1.3
1,925,619	+				+1.8
1,925,619	+				-1.1
1,925,619	+				+1.0
1,925,620	-				+2.3
1,925,620	-				+2.7
1,925,745	-				+2.2
1,925,772	-				-1.2
1,925,774	+				+0.5
1,925,774	+				+1.2
1,925,774	+				+1.1
1,925,774	+				-0.8
1,925,774	+				+0.1
1,925,775	-				-1.2
1,925,775	-				-0.6
1,925,775	-				+0.1
1,925,775	-				-1.3
1,925,775	-				-0.8
1,925,778	+				-0.1
1,925,778	+				+0.1
1,925,778	+				+0.2
1,925,778	+				-1.0
1,925,779	-				+0.8
1,925,784	+				-0.6
1,925,785	-				-3.2
1,925,785	-				+1.0
1,925,884	+				+0.6
1,925,953	+				-0.3
1,925,953	+				-1.0
1,925,953	+				-2.9
1,925,954	-				-0.6
1,926,155	+		Psest_1826	0.41	+3.1
1,926,155	+		Psest_1826	0.41	-1.2
1,926,156	-		Psest_1826	0.41	-0.9
1,926,156	-		Psest_1826	0.41	-0.5
1,926,156	-		Psest_1826	0.41	-2.3
1,926,156	-		Psest_1826	0.41	-0.7
1,926,430	-				-1.3
1,926,430	-				+0.5
1,926,432	-				+0.1
1,926,432	-				-0.4
1,926,432	-				+2.5
1,926,552	+				-0.6
1,926,552	+				+1.0
1,926,553	-				-2.3
1,926,614	+				+1.1
1,926,615	-				-0.9
1,926,615	-				+0.5
1,926,615	-				+0.6
1,926,646	+				-2.1
1,926,646	+				+3.0
1,926,679	+				-2.4
1,926,680	-				-0.4