Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1208

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,310,404	+		Psest_1207	0.45	+0.3
1,310,404	+		Psest_1207	0.45	+0.3
1,310,404	+		Psest_1207	0.45	+1.0
1,310,404	+		Psest_1207	0.45	+0.9
1,310,404	+		Psest_1207	0.45	+1.0
1,310,404	+		Psest_1207	0.45	+1.8
1,310,405	-		Psest_1207	0.45	-1.4
1,310,405	-		Psest_1207	0.45	-2.0
1,310,405	-		Psest_1207	0.45	-0.0
1,310,461	+		Psest_1207	0.52	+1.8
1,310,788	+		Psest_1207	0.89	-2.0
1,310,789	-		Psest_1207	0.89	+0.3
1,310,827	+				-2.3
1,310,827	+				-1.3
1,310,827	+				-0.2
1,310,827	+				-0.0
1,310,827	+				-1.9
1,310,827	+				+0.5
1,310,828	-				-0.7
1,310,828	-				-0.5
1,310,828	-				-0.1
1,310,828	-				+0.3
1,311,043	+				-1.3
1,311,043	+				+2.1
1,311,043	+				+0.3
1,311,043	+				-0.5
1,311,044	-				-1.2
1,311,044	-				+0.8
1,311,044	-				+1.4
1,311,044	-				-2.0
1,311,044	-				-1.0
1,311,044	-				+0.8
1,311,044	-				+1.0
1,311,056	+				-0.2
1,311,056	+				-1.4
1,311,056	+				-1.0
1,311,056	+				+0.2
1,311,057	-				-0.2
1,311,057	-				+0.8
1,311,057	-				-1.1
1,311,112	+				-0.6
1,311,112	+				+0.0
1,311,112	+				+1.0
1,311,113	-				-2.3
1,311,113	-				-0.6
1,311,220	+		Psest_1208	0.11	-1.0
1,311,221	-		Psest_1208	0.11	-3.1
1,311,221	-		Psest_1208	0.11	-3.1
1,311,284	-		Psest_1208	0.16	-0.2
1,311,316	+		Psest_1208	0.18	+2.0
1,311,317	-		Psest_1208	0.19	+1.9
1,311,368	-		Psest_1208	0.22	-1.4
1,311,700	+		Psest_1208	0.48	-1.1
1,311,700	+		Psest_1208	0.48	+0.9
1,311,700	+		Psest_1208	0.48	-1.5
1,311,700	+		Psest_1208	0.48	+0.3
1,311,700	+		Psest_1208	0.48	+0.5
1,311,700	+		Psest_1208	0.48	-0.2
1,311,700	+		Psest_1208	0.48	+0.0
1,311,700	+		Psest_1208	0.48	+0.4
1,311,700	+		Psest_1208	0.48	+1.8
1,311,701	-		Psest_1208	0.48	-0.8
1,311,701	-		Psest_1208	0.48	+0.4
1,311,701	-		Psest_1208	0.48	+2.7
1,311,701	-		Psest_1208	0.48	-1.4
1,311,701	-		Psest_1208	0.48	+2.0
1,311,701	-		Psest_1208	0.48	-2.1
1,312,084	+		Psest_1208	0.77	-0.3
1,312,084	+		Psest_1208	0.77	-0.4
1,312,084	+		Psest_1208	0.77	+0.2
1,312,084	+		Psest_1208	0.77	+1.1
1,312,085	-		Psest_1208	0.77	+0.2
1,312,085	-		Psest_1208	0.77	+0.2
1,312,297	+				-1.6
1,312,297	+				-0.3
1,312,298	-				-0.7
1,312,363	+				+1.3
1,312,363	+				-3.5
1,312,558	-		Psest_1209	0.10	+0.4
1,312,558	-		Psest_1209	0.10	-0.2
1,312,731	+		Psest_1209	0.31	+0.2
1,312,731	+		Psest_1209	0.31	-1.0
1,312,732	-		Psest_1209	0.31	-0.4
1,312,734	+		Psest_1209	0.31	+0.1
1,312,734	+		Psest_1209	0.31	-0.7
1,312,735	-		Psest_1209	0.31	+1.0
1,312,735	-		Psest_1209	0.31	-0.5
1,312,812	+		Psest_1209	0.40	-2.4
1,312,812	+		Psest_1209	0.40	+0.2
1,312,812	+		Psest_1209	0.40	-0.4
1,312,812	+		Psest_1209	0.40	-2.0
1,312,812	+		Psest_1209	0.40	-0.1
1,312,812	+		Psest_1209	0.40	+0.5
1,312,812	+		Psest_1209	0.40	+1.1
1,312,812	+		Psest_1209	0.40	+0.4
1,312,813	-		Psest_1209	0.41	-3.3
1,312,813	-		Psest_1209	0.41	+0.1
1,312,813	-		Psest_1209	0.41	+0.6
1,313,145	+		Psest_1209	0.80	-0.1
1,313,146	-		Psest_1209	0.80	-0.4
1,313,146	-		Psest_1209	0.80	-1.7
1,313,146	-		Psest_1209	0.80	-0.2
1,313,146	-		Psest_1209	0.80	+0.1
1,313,146	-		Psest_1209	0.80	+2.7
1,313,175	+		Psest_1209	0.83	-1.0
1,313,176	-		Psest_1209	0.83	+0.1