Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1181

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,282,252	+				+2.5
1,282,252	+				-0.1
1,282,253	-				+0.7
1,282,253	-				+0.5
1,282,253	-				+0.5
1,282,342	+				-1.5
1,282,342	+				+0.2
1,282,342	+				+0.9
1,282,343	-				+2.8
1,282,343	-				+1.3
1,282,343	-				+0.8
1,282,402	+		Psest_1180	0.15	-1.2
1,282,403	-		Psest_1180	0.16	+0.6
1,282,403	-		Psest_1180	0.16	+1.6
1,282,403	-		Psest_1180	0.16	-1.7
1,282,403	-		Psest_1180	0.16	+3.9
1,282,403	-		Psest_1180	0.16	+1.2
1,282,458	-		Psest_1180	0.23	-1.8
1,282,526	-		Psest_1180	0.31	+1.2
1,282,534	+		Psest_1180	0.32	-0.4
1,282,534	+		Psest_1180	0.32	+0.5
1,282,534	+		Psest_1180	0.32	-3.2
1,282,535	-		Psest_1180	0.32	+1.7
1,282,787	-		Psest_1180	0.65	+2.7
1,282,945	+		Psest_1180	0.85	-2.1
1,282,964	-		Psest_1180	0.87	-0.4
1,283,084	-				+2.3
1,283,084	-				+0.1
1,283,084	-				+1.3
1,283,107	+				+2.2
1,283,107	+				+1.1
1,283,107	+				+2.1
1,283,107	+				-0.3
1,283,150	+				+0.6
1,283,150	+				+0.2
1,283,171	+				+0.0
1,283,171	+				-1.5
1,283,253	+				+1.0
1,283,254	-				+0.6
1,283,508	+		Psest_1181	0.14	-1.2
1,283,610	+		Psest_1181	0.20	-1.8
1,283,638	-		Psest_1181	0.22	+1.3
1,283,638	-		Psest_1181	0.22	+2.5
1,283,814	+		Psest_1181	0.32	-1.4
1,283,814	+		Psest_1181	0.32	-1.5
1,283,814	+		Psest_1181	0.32	+2.0
1,283,814	+		Psest_1181	0.32	+2.2
1,283,814	+		Psest_1181	0.32	-0.8
1,283,814	+		Psest_1181	0.32	+0.6
1,283,814	+		Psest_1181	0.32	+1.2
1,283,814	+		Psest_1181	0.32	-0.4
1,283,815	-		Psest_1181	0.32	+2.4
1,283,869	-		Psest_1181	0.35	+2.4
1,283,869	-		Psest_1181	0.35	-1.0
1,283,907	+		Psest_1181	0.37	-0.0
1,283,908	-		Psest_1181	0.37	+0.3
1,283,908	-		Psest_1181	0.37	+0.6
1,284,159	+		Psest_1181	0.51	-0.1
1,284,160	-		Psest_1181	0.51	+2.1
1,284,160	-		Psest_1181	0.51	+0.2
1,284,390	+		Psest_1181	0.64	-2.5
1,284,390	+		Psest_1181	0.64	+0.3
1,284,390	+		Psest_1181	0.64	+1.0
1,284,390	+		Psest_1181	0.64	-0.4
1,284,390	+		Psest_1181	0.64	-1.0
1,284,390	+		Psest_1181	0.64	+0.3
1,284,390	+		Psest_1181	0.64	-0.2
1,284,390	+		Psest_1181	0.64	+1.6
1,284,390	+		Psest_1181	0.64	+2.6
1,284,390	+		Psest_1181	0.64	-1.8
1,284,390	+		Psest_1181	0.64	-0.3
1,284,390	+		Psest_1181	0.64	+0.3
1,284,390	+		Psest_1181	0.64	-1.0
1,284,391	-		Psest_1181	0.64	-1.5
1,284,391	-		Psest_1181	0.64	+1.2
1,284,391	-		Psest_1181	0.64	+1.3
1,284,391	-		Psest_1181	0.64	+0.6
1,284,391	-		Psest_1181	0.64	+0.6
1,284,391	-		Psest_1181	0.64	+2.3
1,284,391	-		Psest_1181	0.64	-0.6
1,284,391	-		Psest_1181	0.64	+1.9
1,284,391	-		Psest_1181	0.64	+0.4
1,284,483	+		Psest_1181	0.69	+0.9
1,284,484	-		Psest_1181	0.69	-0.9
1,284,501	+		Psest_1181	0.70	+1.2
1,284,703	+		Psest_1181	0.81	+1.2
1,284,704	-		Psest_1181	0.81	+0.0
1,284,704	-		Psest_1181	0.81	+0.5
1,284,706	-		Psest_1181	0.82	+0.4
1,284,852	+		Psest_1181	0.90	-1.1
1,284,933	+				+0.9
1,285,163	+				-0.6
1,285,171	+				-1.4
1,285,171	+				-0.4
1,285,171	+				-2.3
1,285,172	-				+2.2
1,285,207	-				+3.8
1,285,272	-				-0.7
1,285,479	-		Psest_1182	0.21	-1.0
1,285,604	-		Psest_1182	0.35	+0.2
1,285,742	+		Psest_1182	0.50	+0.2
1,285,742	+		Psest_1182	0.50	+1.6
1,285,742	+		Psest_1182	0.50	-2.3
1,285,742	+		Psest_1182	0.50	-0.1
1,285,742	+		Psest_1182	0.50	-2.2
1,285,743	-		Psest_1182	0.50	-1.1
1,285,743	-		Psest_1182	0.50	-0.6
1,285,743	-		Psest_1182	0.50	+1.1
1,285,743	-		Psest_1182	0.50	+0.1
1,285,743	-		Psest_1182	0.50	+0.9
1,285,743	-		Psest_1182	0.50	+0.1