Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1162
Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,261,899 | + | Psest_1161 | 0.16 | -1.3 | |
1,261,900 | - | Psest_1161 | 0.16 | -1.1 | |
1,261,900 | - | Psest_1161 | 0.16 | -3.6 | |
1,262,260 | - | Psest_1161 | 0.56 | -1.0 | |
1,262,636 | + | +0.3 | |||
1,262,636 | + | -0.7 | |||
1,263,078 | - | Psest_1162 | 0.60 | +1.4 | |
1,263,078 | - | Psest_1162 | 0.60 | +0.2 | |
1,263,156 | - | Psest_1162 | 0.72 | +0.1 | |
1,263,336 | - | -0.7 | |||
1,263,336 | - | -2.1 | |||
1,263,336 | - | -0.2 | |||
1,263,448 | - | +1.5 | |||
1,264,212 | - | Psest_1163 | 0.36 | -2.4 |
Or see this region's nucleotide sequence