Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1121

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,213,584	+				+3.0
1,213,707	+		Psest_1120	0.10	+0.3
1,213,850	-		Psest_1120	0.32	+0.7
1,213,944	+		Psest_1120	0.47	-0.2
1,213,945	-		Psest_1120	0.47	-3.4
1,213,945	-		Psest_1120	0.47	-0.9
1,214,128	-		Psest_1120	0.76	+3.6
1,214,160	+		Psest_1120	0.81	+2.2
1,214,160	+		Psest_1120	0.81	+0.2
1,214,161	-		Psest_1120	0.81	-1.1
1,214,161	-		Psest_1120	0.81	+0.5
1,214,161	-		Psest_1120	0.81	-1.0
1,214,161	-		Psest_1120	0.81	+0.1
1,214,161	-		Psest_1120	0.81	-1.7
1,214,161	-		Psest_1120	0.81	-3.1
1,214,302	+				+0.5
1,214,313	-				-1.2
1,214,391	-				+2.0
1,214,391	-				+2.2
1,214,501	-				+2.6
1,214,585	+				+1.9
1,214,585	+				-1.0
1,214,601	+		Psest_1121	0.13	+0.9
1,214,601	+		Psest_1121	0.13	-0.0
1,214,601	+		Psest_1121	0.13	+0.2
1,214,601	+		Psest_1121	0.13	+1.7
1,214,602	-		Psest_1121	0.13	+2.8
1,214,602	-		Psest_1121	0.13	+3.2
1,214,602	-		Psest_1121	0.13	+0.3
1,214,602	-		Psest_1121	0.13	+0.4
1,214,745	-		Psest_1121	0.38	+2.0
1,214,984	+		Psest_1121	0.81	+0.4
1,214,984	+		Psest_1121	0.81	+1.1
1,214,984	+		Psest_1121	0.81	-0.2
1,214,984	+		Psest_1121	0.81	+0.7
1,214,984	+		Psest_1121	0.81	+1.5
1,214,984	+		Psest_1121	0.81	+0.6
1,214,984	+		Psest_1121	0.81	+1.0
1,214,984	+		Psest_1121	0.81	+3.1
1,214,985	-		Psest_1121	0.81	+3.3
1,214,985	-		Psest_1121	0.81	+2.3
1,214,985	-		Psest_1121	0.81	+1.2
1,214,985	-		Psest_1121	0.81	+1.4
1,214,985	-		Psest_1121	0.81	+4.6
1,214,985	-		Psest_1121	0.81	+1.7
1,214,985	-		Psest_1121	0.81	+1.2
1,215,011	+		Psest_1121	0.86	+2.5
1,215,035	+				+2.1
1,215,035	+				+3.8
1,215,035	+				+3.4
1,215,035	+				-0.5
1,215,036	-				+1.2
1,215,036	-				-1.2
1,215,036	-				+1.7
1,215,036	-				+3.8
1,215,036	-				+0.9
1,215,036	-				+2.7
1,215,036	-				+1.1
1,215,036	-				+1.8
1,215,036	-				+5.0
1,215,036	-				+1.2
1,215,036	-				+1.7
1,215,036	-				+2.8
1,215,069	-				+2.8
1,215,069	-				+2.4
1,215,237	+				+0.9
1,215,238	-				+1.2
1,215,315	+				-0.3
1,215,316	-				+0.8
1,215,421	+				+1.9
1,215,501	+				+0.2
1,215,518	+				+0.0
1,215,519	-				+0.5
1,215,568	+				-1.6
1,215,572	-				-1.1
1,215,592	+				+3.3
1,215,592	+				-0.5
1,215,592	+				+0.6
1,215,593	-				+2.1
1,215,593	-				+1.6
1,215,613	+				+1.1
1,215,753	+				+0.5
1,215,754	-				-0.2
1,216,005	+		Psest_1122	0.18	-0.9
1,216,006	-		Psest_1122	0.18	-0.6
1,216,006	-		Psest_1122	0.18	+0.0
1,216,071	-		Psest_1122	0.22	-0.3