Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4318

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,517,359	-		Psest_4317	0.20	+2.0
4,517,374	+		Psest_4317	0.22	+0.1
4,517,463	+		Psest_4317	0.31	-2.3
4,517,463	+		Psest_4317	0.31	+0.8
4,517,463	+		Psest_4317	0.31	+0.6
4,517,463	+		Psest_4317	0.31	+1.8
4,517,463	+		Psest_4317	0.31	+0.9
4,517,463	+		Psest_4317	0.31	+0.0
4,517,463	+		Psest_4317	0.31	+0.3
4,517,463	+		Psest_4317	0.31	-1.0
4,517,463	+		Psest_4317	0.31	-1.2
4,517,463	+		Psest_4317	0.31	+0.1
4,517,464	-		Psest_4317	0.31	+2.6
4,517,464	-		Psest_4317	0.31	+1.2
4,517,464	-		Psest_4317	0.31	-1.5
4,517,464	-		Psest_4317	0.31	+0.4
4,517,464	-		Psest_4317	0.31	+1.1
4,517,464	-		Psest_4317	0.31	-0.1
4,517,464	-		Psest_4317	0.31	+0.3
4,517,464	-		Psest_4317	0.31	-1.0
4,517,464	-		Psest_4317	0.31	+2.1
4,517,464	-		Psest_4317	0.31	-0.1
4,517,581	-		Psest_4317	0.43	+1.2
4,517,620	+		Psest_4317	0.47	-1.4
4,517,621	-		Psest_4317	0.47	+0.4
4,517,643	+		Psest_4317	0.49	-0.7
4,517,644	-		Psest_4317	0.49	+0.2
4,517,781	+		Psest_4317	0.63	+1.9
4,517,781	+		Psest_4317	0.63	+0.1
4,517,781	+		Psest_4317	0.63	+1.5
4,517,782	-		Psest_4317	0.63	+1.9
4,517,782	-		Psest_4317	0.63	-0.9
4,517,859	+		Psest_4317	0.71	+0.3
4,517,860	-		Psest_4317	0.71	+0.1
4,518,122	+				-1.2
4,518,207	+				-1.1
4,518,207	+				-3.3
4,518,208	-				+0.1
4,518,208	-				+0.6
4,518,242	+				-0.6
4,518,242	+				-1.7
4,518,242	+				+2.0
4,518,242	+				+0.0
4,518,242	+				-0.2
4,518,242	+				-1.8
4,518,243	-				+1.4
4,518,243	-				-0.4
4,518,243	-				-0.5
4,518,243	-				-0.7
4,518,243	-				-0.5
4,518,243	-				-0.1
4,518,243	-				-1.7
4,518,243	-				+0.7
4,518,306	+		Psest_4318	0.15	-1.3
4,518,306	+		Psest_4318	0.15	-0.7
4,518,307	-		Psest_4318	0.15	-0.1
4,518,382	+		Psest_4318	0.33	-0.7
4,518,383	-		Psest_4318	0.33	-1.4
4,518,383	-		Psest_4318	0.33	-2.1
4,518,383	-		Psest_4318	0.33	-1.5
4,518,455	-		Psest_4318	0.50	-0.1
4,518,552	+		Psest_4318	0.73	-2.2
4,518,552	+		Psest_4318	0.73	-0.5
4,518,552	+		Psest_4318	0.73	-3.3
4,518,553	-		Psest_4318	0.73	-0.8
4,518,715	+				+0.1
4,518,715	+				-2.9
4,518,716	-				+0.7
4,518,716	-				+0.6
4,518,716	-				-1.7
4,518,716	-				+1.3
4,518,716	-				-0.7
4,518,716	-				-1.2
4,518,716	-				+0.7
4,518,716	-				+0.1
4,518,716	-				-2.9
4,518,716	-				-1.7
4,518,716	-				+2.0
4,518,716	-				-0.6
4,518,730	+		Psest_4319	0.10	+0.3
4,518,731	-		Psest_4319	0.10	+0.5
4,518,731	-		Psest_4319	0.10	-1.1
4,518,793	+		Psest_4319	0.22	+1.2
4,518,793	+		Psest_4319	0.22	+1.5
4,518,793	+		Psest_4319	0.22	-0.7
4,518,793	+		Psest_4319	0.22	-0.3
4,518,793	+		Psest_4319	0.22	+2.6
4,518,793	+		Psest_4319	0.22	-0.3
4,518,793	+		Psest_4319	0.22	+1.3
4,518,794	-		Psest_4319	0.22	+0.3
4,518,997	+		Psest_4319	0.60	-1.1
4,519,214	+				+2.3
4,519,215	-				-1.0
4,519,215	-				-2.3
4,519,248	+				+0.2
4,519,248	+				-0.9
4,519,248	+				-1.2
4,519,248	+				+0.0
4,519,248	+				+0.6
4,519,248	+				+1.7
4,519,249	-				+0.5
4,519,249	-				-1.5
4,519,249	-				+1.0
4,519,252	+				-0.2
4,519,252	+				+0.4
4,519,252	+				-1.1
4,519,252	+				+0.9
4,519,252	+				+1.0
4,519,252	+				+0.5
4,519,252	+				-1.5
4,519,252	+				+0.1
4,519,253	-				-1.5
4,519,253	-				-0.9
4,519,253	-				-3.3
4,519,317	+				-0.4
4,519,321	+				-0.5
4,519,388	+				+1.8
4,519,388	+				+3.1
4,519,388	+				+2.4
4,519,389	-				+0.5
4,519,389	-				+0.7
4,519,516	-				-0.9