Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4178

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,355,748	+		Psest_4177	0.29	-0.6
4,355,749	-		Psest_4177	0.30	-1.3
4,355,802	+		Psest_4177	0.37	-2.9
4,355,876	+		Psest_4177	0.46	+2.1
4,356,278	+				+1.2
4,356,278	+				-0.5
4,356,279	-				-1.0
4,356,279	-				-0.8
4,356,369	+				+0.2
4,356,680	-		Psest_4178	0.45	+0.7
4,356,680	-		Psest_4178	0.45	-1.1
4,356,729	-		Psest_4178	0.50	+2.3
4,356,729	-		Psest_4178	0.50	+0.2
4,356,926	+		Psest_4178	0.73	+0.2
4,356,926	+		Psest_4178	0.73	+1.1
4,357,086	-				+2.3
4,357,125	-				+0.9
4,357,125	-				+0.6
4,357,125	-				-0.1
4,357,125	-				+0.6
4,357,125	-				+0.7
4,357,125	-				+0.3
4,357,125	-				-1.4
4,357,125	-				-0.5
4,357,125	-				-0.3
4,357,125	-				-0.8
4,357,125	-				+0.2
4,357,126	+				+0.1
4,357,126	+				+0.1
4,357,135	+				+1.4
4,357,135	+				+0.1
4,357,160	+				-1.0
4,357,160	+				-2.4
4,357,161	-				-1.3
4,357,161	-				-0.7
4,357,161	-				+3.4
4,357,161	-				+0.7
4,357,466	-				+0.5
4,357,486	+				-3.5
4,357,560	-		Psest_4180	0.16	-0.2
4,357,560	-		Psest_4180	0.16	+1.9
4,357,729	+		Psest_4180	0.41	+1.3
4,357,729	+		Psest_4180	0.41	+1.4
4,357,730	-		Psest_4180	0.41	-0.5
4,357,730	-		Psest_4180	0.41	+0.5
4,357,730	-		Psest_4180	0.41	-0.5
4,357,730	-		Psest_4180	0.41	+0.5
4,357,738	+		Psest_4180	0.42	-0.3
4,357,738	+		Psest_4180	0.42	+1.8
4,357,738	+		Psest_4180	0.42	-1.3
4,357,738	+		Psest_4180	0.42	-0.1
4,357,738	+		Psest_4180	0.42	+2.3
4,357,738	+		Psest_4180	0.42	+0.9
4,357,739	-		Psest_4180	0.42	+0.2
4,357,739	-		Psest_4180	0.42	-0.7
4,357,739	-		Psest_4180	0.42	-0.5
4,357,739	-		Psest_4180	0.42	+0.5
4,357,739	-		Psest_4180	0.42	+0.7
4,357,739	-		Psest_4180	0.42	+4.0
4,357,739	-		Psest_4180	0.42	+1.0
4,357,739	-		Psest_4180	0.42	+0.4
4,357,794	-		Psest_4180	0.50	+0.4
4,357,804	+		Psest_4180	0.52	+1.9
4,357,804	+		Psest_4180	0.52	-1.3
4,357,804	+		Psest_4180	0.52	-0.9
4,357,804	+		Psest_4180	0.52	+2.0
4,357,804	+		Psest_4180	0.52	-1.3
4,357,804	+		Psest_4180	0.52	-0.6
4,357,805	-		Psest_4180	0.52	-0.7
4,357,805	-		Psest_4180	0.52	+0.4
4,357,805	-		Psest_4180	0.52	+0.9
4,357,819	+		Psest_4180	0.54	+1.7
4,357,820	-		Psest_4180	0.54	-0.5
4,357,846	+		Psest_4180	0.58	+0.2
4,357,847	-		Psest_4180	0.58	-1.3
4,357,864	-		Psest_4180	0.60	-1.4
4,358,038	+		Psest_4180	0.86	+0.9
4,358,038	+		Psest_4180	0.86	-0.3
4,358,039	-		Psest_4180	0.86	+0.3
4,358,039	-		Psest_4180	0.86	-2.1
4,358,069	-				+2.0
4,358,069	-				-0.6
4,358,109	-				-2.0