Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3834

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
4,002,943	+				+1.4
4,002,944	-				+0.9
4,002,944	-				-0.1
4,002,944	-				-1.1
4,002,944	-				+0.6
4,002,944	-				-0.4
4,002,944	-				-0.5
4,002,944	-				-0.6
4,002,967	+				-0.1
4,002,968	-				-0.1
4,003,202	+		Psest_3832	0.69	+0.0
4,003,202	+		Psest_3832	0.69	-2.0
4,003,355	-				+1.9
4,003,722	+				+0.3
4,003,723	-				-0.9
4,003,785	+				+0.1
4,003,805	+				+0.4
4,003,805	+				+0.3
4,003,805	+				+0.8
4,003,805	+				+3.5
4,003,806	-				-0.0
4,003,806	-				+0.7
4,003,806	-				-2.4
4,004,006	+		Psest_3834	0.11	+2.6
4,004,007	-		Psest_3834	0.11	+0.7
4,004,147	+		Psest_3834	0.23	-0.1
4,004,147	+		Psest_3834	0.23	+1.6
4,004,147	+		Psest_3834	0.23	+0.4
4,004,206	+		Psest_3834	0.28	-1.6
4,004,206	+		Psest_3834	0.28	+1.2
4,004,206	+		Psest_3834	0.28	+1.2
4,004,206	+		Psest_3834	0.28	+0.3
4,004,207	-		Psest_3834	0.28	+3.4
4,004,251	+		Psest_3834	0.31	-1.6
4,004,251	+		Psest_3834	0.31	+2.4
4,004,251	+		Psest_3834	0.31	-0.1
4,004,252	-		Psest_3834	0.32	+1.7
4,004,252	-		Psest_3834	0.32	+2.6
4,004,828	+		Psest_3834	0.80	+1.7
4,004,941	+		Psest_3834	0.90	+2.0
4,005,019	+				+1.1
4,005,048	+				+1.3
4,005,048	+				+2.0
4,005,049	-				+0.7
4,005,049	-				+0.8
4,005,049	-				+0.8
4,005,049	-				-0.3
4,005,049	-				+0.3
4,005,227	+		Psest_3835	0.77	+0.7
4,005,227	+		Psest_3835	0.77	+0.0
4,005,227	+		Psest_3835	0.77	+3.6
4,005,227	+		Psest_3835	0.77	-0.4
4,005,227	+		Psest_3835	0.77	+3.8
4,005,227	+		Psest_3835	0.77	+1.5
4,005,227	+		Psest_3835	0.77	-2.6
4,005,227	+		Psest_3835	0.77	+0.6
4,005,228	-		Psest_3835	0.78	-2.8
4,005,228	-		Psest_3835	0.78	+0.1
4,005,228	-		Psest_3835	0.78	-2.0
4,005,228	-		Psest_3835	0.78	+0.0
4,005,228	-		Psest_3835	0.78	+0.6
4,005,228	-		Psest_3835	0.78	+0.7
4,005,228	-		Psest_3835	0.78	+1.4
4,005,228	-		Psest_3835	0.78	+0.1
4,005,228	-		Psest_3835	0.78	+1.4
4,005,228	-		Psest_3835	0.78	-0.2
4,005,228	-		Psest_3835	0.78	-1.4
4,005,228	-		Psest_3835	0.78	-1.7
4,005,228	-		Psest_3835	0.78	+0.5
4,005,228	-		Psest_3835	0.78	+0.8
4,005,231	+		Psest_3835	0.80	+0.2
4,005,231	+		Psest_3835	0.80	+4.0
4,005,231	+		Psest_3835	0.80	+0.5
4,005,231	+		Psest_3835	0.80	+2.3
4,005,232	-		Psest_3835	0.80	-1.2
4,005,232	-		Psest_3835	0.80	-0.5
4,005,232	-		Psest_3835	0.80	+1.0
4,005,232	-		Psest_3835	0.80	+0.6
4,005,233	+		Psest_3835	0.81	-0.6
4,005,233	+		Psest_3835	0.81	+1.6
4,005,234	-		Psest_3835	0.82	-2.0
4,005,234	-		Psest_3835	0.82	-0.1
4,005,234	-		Psest_3835	0.82	+0.8
4,005,302	-				-2.2
4,005,302	-				+0.4
4,005,302	-				-1.5
4,005,303	+				-0.4
4,005,304	-				-0.5
4,005,380	+				-1.4
4,005,422	+				-0.4
4,005,422	+				-0.3
4,005,423	-				-0.1
4,005,423	-				-0.5
4,005,461	+				+2.0
4,005,462	-				-1.6
4,005,462	-				-0.8
4,005,462	-				-2.8
4,005,462	-				-3.0
4,005,464	+				+1.1
4,005,464	+				-0.1
4,005,464	+				+2.1
4,005,465	-				-0.2
4,005,465	-				-0.1
4,005,465	-				-1.2
4,005,465	-				-3.7
4,005,465	-				+0.7
4,005,465	-				-0.7
4,005,465	-				-2.6
4,005,465	-				-1.7
4,005,521	-				-1.5
4,005,521	-				-1.0
4,005,541	+				-0.7
4,005,541	+				+1.3