Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3699 and Psest_3700 are separated by 10 nucleotides Psest_3700 and Psest_3701 overlap by 4 nucleotides
Psest_3699: Psest_3699 - Dehydrogenases (flavoproteins), at 3,863,619 to 3,864,869
_3699
Psest_3700: Psest_3700 - hypothetical protein, at 3,864,880 to 3,865,386
_3700
Psest_3701: Psest_3701 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 3,865,383 to 3,866,576
_3701
Position (kb)
3864
3865
3866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3863.928 kb on + strand, within Psest_3699 at 3863.928 kb on + strand, within Psest_3699 at 3863.928 kb on + strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3864.001 kb on - strand, within Psest_3699 at 3864.665 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.694 kb on - strand, within Psest_3699 at 3864.720 kb on + strand, within Psest_3699 at 3864.720 kb on + strand, within Psest_3699 at 3864.723 kb on + strand, within Psest_3699 at 3864.723 kb on + strand, within Psest_3699 at 3864.724 kb on - strand, within Psest_3699 at 3864.802 kb on - strand at 3864.802 kb on - strand at 3865.295 kb on - strand, within Psest_3700 at 3865.343 kb on - strand at 3865.343 kb on - strand at 3865.392 kb on + strand at 3865.689 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701 at 3866.129 kb on + strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.130 kb on - strand, within Psest_3701 at 3866.221 kb on - strand, within Psest_3701
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 3,863,928 + Psest_3699 0.25 -1.1 3,863,928 + Psest_3699 0.25 +0.5 3,863,928 + Psest_3699 0.25 -1.4 3,863,929 - Psest_3699 0.25 -0.3 3,863,929 - Psest_3699 0.25 -2.3 3,863,929 - Psest_3699 0.25 +0.3 3,864,001 - Psest_3699 0.31 +0.7 3,864,665 + Psest_3699 0.84 -0.1 3,864,678 + Psest_3699 0.85 -0.7 3,864,678 + Psest_3699 0.85 +2.4 3,864,678 + Psest_3699 0.85 +0.1 3,864,678 + Psest_3699 0.85 -1.4 3,864,678 + Psest_3699 0.85 -0.2 3,864,679 - Psest_3699 0.85 +0.1 3,864,679 - Psest_3699 0.85 +0.7 3,864,679 - Psest_3699 0.85 -2.3 3,864,679 - Psest_3699 0.85 -0.4 3,864,679 - Psest_3699 0.85 +1.8 3,864,679 - Psest_3699 0.85 +1.1 3,864,694 - Psest_3699 0.86 -0.3 3,864,720 + Psest_3699 0.88 -1.4 3,864,720 + Psest_3699 0.88 +2.1 3,864,723 + Psest_3699 0.88 +1.6 3,864,723 + Psest_3699 0.88 -1.0 3,864,724 - Psest_3699 0.88 +0.8 3,864,802 - +0.8 3,864,802 - -0.1 3,865,295 - Psest_3700 0.82 +1.3 3,865,343 - -0.9 3,865,343 - -0.8 3,865,392 + -0.1 3,865,689 - Psest_3701 0.26 +1.0 3,865,834 - Psest_3701 0.38 +2.1 3,865,834 - Psest_3701 0.38 +0.2 3,866,129 + Psest_3701 0.62 +0.0 3,866,130 - Psest_3701 0.63 +0.7 3,866,130 - Psest_3701 0.63 -0.8 3,866,130 - Psest_3701 0.63 +0.2 3,866,130 - Psest_3701 0.63 -1.4 3,866,221 - Psest_3701 0.70 +0.3
Or see this region's nucleotide sequence