Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3230

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
3,402,073	+		Psest_3229	0.86	-0.8
3,402,074	-		Psest_3229	0.86	+1.4
3,402,074	-		Psest_3229	0.86	+0.0
3,402,236	+				-0.6
3,402,237	-				+2.3
3,402,419	+				+1.6
3,402,419	+				+0.4
3,402,625	+		Psest_3230	0.35	-0.0
3,402,625	+		Psest_3230	0.35	+3.6
3,402,626	-		Psest_3230	0.35	+1.4
3,402,626	-		Psest_3230	0.35	+0.6
3,402,626	-		Psest_3230	0.35	+2.1
3,402,626	-		Psest_3230	0.35	-1.1
3,402,629	+		Psest_3230	0.36	-0.9
3,402,629	+		Psest_3230	0.36	+1.0
3,402,630	-		Psest_3230	0.36	+0.0
3,402,630	-		Psest_3230	0.36	+1.4
3,402,630	-		Psest_3230	0.36	-2.0
3,402,670	+		Psest_3230	0.42	-1.0
3,402,670	+		Psest_3230	0.42	+3.1
3,402,670	+		Psest_3230	0.42	+1.0
3,402,670	+		Psest_3230	0.42	+1.2
3,402,670	+		Psest_3230	0.42	+1.6
3,402,670	+		Psest_3230	0.42	+0.3
3,402,670	+		Psest_3230	0.42	+0.8
3,402,671	-		Psest_3230	0.43	+2.7
3,402,671	-		Psest_3230	0.43	-1.2
3,402,671	-		Psest_3230	0.43	+2.1
3,402,671	-		Psest_3230	0.43	-0.3
3,402,733	+		Psest_3230	0.53	+1.7
3,402,733	+		Psest_3230	0.53	+1.6
3,402,733	+		Psest_3230	0.53	+0.6
3,402,733	+		Psest_3230	0.53	+1.4
3,402,734	-		Psest_3230	0.53	+0.6
3,403,026	-				-0.0
3,403,026	-				-0.4
3,403,061	-				+0.8
3,403,102	+		Psest_3231	0.25	+0.5
3,403,103	-		Psest_3231	0.25	+0.1
3,403,103	-		Psest_3231	0.25	-0.8
3,403,103	-		Psest_3231	0.25	-1.8
3,403,285	+				+2.1
3,403,285	+				-1.0
3,403,395	+		Psest_3232	0.53	-0.0
3,403,395	+		Psest_3232	0.53	-0.0
3,403,395	+		Psest_3232	0.53	+0.3
3,403,395	+		Psest_3232	0.53	-0.6
3,403,395	+		Psest_3232	0.53	-1.6
3,403,395	+		Psest_3232	0.53	+0.6
3,403,395	+		Psest_3232	0.53	+1.2
3,403,395	+		Psest_3232	0.53	-0.6
3,403,395	+		Psest_3232	0.53	-2.6
3,403,395	+		Psest_3232	0.53	+2.2
3,403,395	+		Psest_3232	0.53	+0.7
3,403,395	+		Psest_3232	0.53	+0.1
3,403,396	-		Psest_3232	0.54	-2.0
3,403,396	-		Psest_3232	0.54	-0.6
3,403,396	-		Psest_3232	0.54	+0.4
3,403,396	-		Psest_3232	0.54	+0.8
3,403,396	-		Psest_3232	0.54	+1.4
3,403,396	-		Psest_3232	0.54	-0.0
3,403,396	-		Psest_3232	0.54	+0.2
3,403,396	-		Psest_3232	0.54	+2.6
3,403,396	-		Psest_3232	0.54	+1.0
3,403,396	-		Psest_3232	0.54	-1.2
3,403,396	-		Psest_3232	0.54	+1.0
3,403,396	-		Psest_3232	0.54	-0.6
3,403,396	-		Psest_3232	0.54	-0.8
3,403,396	-		Psest_3232	0.54	-0.9
3,403,396	-		Psest_3232	0.54	+1.3
3,403,396	-		Psest_3232	0.54	-2.7
3,403,396	-		Psest_3232	0.54	-0.0
3,403,396	-		Psest_3232	0.54	+1.8
3,403,505	-				-0.0
3,403,505	-				+1.4
3,403,505	-				+2.9
3,403,639	+				-2.6
3,403,639	+				-0.8
3,403,639	+				+0.3