Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3091 and Psest_3092 overlap by 8 nucleotides Psest_3092 and Psest_3093 overlap by 4 nucleotides Psest_3093 and Psest_3094 are separated by 91 nucleotides Psest_3094 and Psest_3095 are separated by 1 nucleotides
Psest_3091: Psest_3091 - GTP-binding protein Era, at 3,270,069 to 3,270,980
_3091
Psest_3092: Psest_3092 - ribonuclease III, bacterial, at 3,270,973 to 3,271,662
_3092
Psest_3093: Psest_3093 - hypothetical protein, at 3,271,659 to 3,272,036
_3093
Psest_3094: Psest_3094 - signal peptidase I, bacterial type, at 3,272,128 to 3,272,982
_3094
Psest_3095: Psest_3095 - GTP-binding protein LepA, at 3,272,984 to 3,274,783
_3095
Position (kb)
3271
3272
3273 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 3271.296 kb on - strand, within Psest_3092 at 3271.296 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.672 kb on - strand at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.847 kb on - strand, within Psest_3093 at 3271.922 kb on - strand, within Psest_3093 at 3271.922 kb on - strand, within Psest_3093 at 3271.931 kb on - strand, within Psest_3093 at 3272.047 kb on - strand at 3272.047 kb on - strand at 3272.047 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.087 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 3,271,296 - Psest_3092 0.47 -1.0 3,271,296 - Psest_3092 0.47 -0.1 3,271,576 - Psest_3092 0.87 -0.4 3,271,576 - Psest_3092 0.87 -0.4 3,271,576 - Psest_3092 0.87 -1.9 3,271,576 - Psest_3092 0.87 -0.4 3,271,672 - -4.2 3,271,837 - Psest_3093 0.47 +1.7 3,271,837 - Psest_3093 0.47 -1.1 3,271,837 - Psest_3093 0.47 +1.3 3,271,837 - Psest_3093 0.47 +1.2 3,271,837 - Psest_3093 0.47 +0.0 3,271,837 - Psest_3093 0.47 +0.2 3,271,837 - Psest_3093 0.47 +5.3 3,271,837 - Psest_3093 0.47 +2.4 3,271,837 - Psest_3093 0.47 +0.6 3,271,837 - Psest_3093 0.47 +0.3 3,271,837 - Psest_3093 0.47 +3.1 3,271,837 - Psest_3093 0.47 +1.3 3,271,837 - Psest_3093 0.47 -0.4 3,271,837 - Psest_3093 0.47 +0.4 3,271,847 - Psest_3093 0.50 +0.3 3,271,922 - Psest_3093 0.70 +1.6 3,271,922 - Psest_3093 0.70 +0.1 3,271,931 - Psest_3093 0.72 -0.0 3,272,047 - -0.1 3,272,047 - +1.4 3,272,047 - +0.5 3,272,085 - +0.9 3,272,085 - +1.5 3,272,085 - -1.2 3,272,085 - +1.9 3,272,085 - +2.0 3,272,085 - +0.8 3,272,085 - +0.7 3,272,085 - +0.9 3,272,085 - -1.2 3,272,087 - +0.3
Or see this region's nucleotide sequence