Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2982 and Psest_2983 are separated by 335 nucleotides Psest_2983 and Psest_2984 are separated by 51 nucleotides Psest_2984 and Psest_2985 are separated by 70 nucleotides Psest_2985 and Psest_2986 are separated by 109 nucleotides Psest_2986 and Psest_2987 are separated by 62 nucleotides Psest_2987 and Psest_2988 are separated by 180 nucleotides
Psest_2982: Psest_2982 - Mg2+ transporter (mgtE), at 3,173,888 to 3,175,324
_2982
Psest_2983: Psest_2983 - hypothetical protein, at 3,175,660 to 3,176,142
_2983
Psest_2984: Psest_2984 - tRNA_Arg_ACG, at 3,176,194 to 3,176,270
_2984
Psest_2985: Psest_2985 - tRNA_Arg_ACG, at 3,176,341 to 3,176,417
_2985
Psest_2986: Psest_2986 - tRNA_Ser_GCT, at 3,176,527 to 3,176,617
_2986
Psest_2987: Psest_2987 - carbon storage regulator (csrA), at 3,176,680 to 3,176,865
_2987
Psest_2988: Psest_2988 - aspartate kinase, monofunctional class, at 3,177,046 to 3,178,284
_2988
Position (kb)
3176
3177 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3175.378 kb on - strand at 3175.378 kb on - strand at 3175.378 kb on - strand at 3175.417 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.614 kb on + strand at 3175.614 kb on + strand at 3175.615 kb on - strand at 3175.615 kb on - strand at 3175.668 kb on - strand at 3175.673 kb on + strand at 3175.673 kb on + strand at 3175.673 kb on + strand at 3175.674 kb on - strand at 3175.674 kb on - strand at 3175.694 kb on + strand at 3175.695 kb on - strand at 3176.039 kb on + strand, within Psest_2983 at 3176.039 kb on + strand, within Psest_2983 at 3176.039 kb on + strand, within Psest_2983 at 3176.245 kb on - strand, within Psest_2984 at 3176.263 kb on - strand at 3176.263 kb on - strand at 3176.263 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.284 kb on - strand at 3176.284 kb on - strand at 3176.946 kb on - strand at 3176.946 kb on - strand at 3176.985 kb on - strand at 3176.985 kb on - strand at 3177.010 kb on - strand at 3177.010 kb on - strand at 3177.010 kb on - strand at 3177.120 kb on - strand at 3177.120 kb on - strand at 3177.120 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 3,175,378 - -0.7 3,175,378 - +0.5 3,175,378 - +1.9 3,175,417 - +1.9 3,175,472 - +0.1 3,175,472 - +0.3 3,175,472 - +2.3 3,175,472 - +1.0 3,175,472 - +2.1 3,175,614 + -1.4 3,175,614 + -0.6 3,175,615 - +3.6 3,175,615 - +0.2 3,175,668 - +1.5 3,175,673 + +0.3 3,175,673 + -1.9 3,175,673 + -0.5 3,175,674 - +1.9 3,175,674 - +1.6 3,175,694 + -1.6 3,175,695 - +0.6 3,176,039 + Psest_2983 0.78 -0.8 3,176,039 + Psest_2983 0.78 -1.2 3,176,039 + Psest_2983 0.78 -1.1 3,176,245 - Psest_2984 0.66 +1.6 3,176,263 - +0.6 3,176,263 - -1.7 3,176,263 - -1.6 3,176,273 - -0.2 3,176,273 - +1.2 3,176,273 - -1.3 3,176,273 - +1.1 3,176,273 - -0.4 3,176,273 - -3.8 3,176,273 - -0.2 3,176,284 - -1.2 3,176,284 - +0.3 3,176,946 - +0.9 3,176,946 - +1.0 3,176,985 - +0.9 3,176,985 - +0.7 3,177,010 - +0.6 3,177,010 - +0.2 3,177,010 - +0.4 3,177,120 - -1.5 3,177,120 - -1.2 3,177,120 - -1.0
Or see this region's nucleotide sequence