Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2938

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
3,134,702	+				+0.6
3,134,702	+				+1.0
3,134,801	+		Psest_2937	0.19	+0.5
3,134,801	+		Psest_2937	0.19	+1.8
3,134,802	-		Psest_2937	0.19	+0.4
3,134,802	-		Psest_2937	0.19	+1.8
3,135,008	+		Psest_2937	0.45	+0.6
3,135,009	-		Psest_2937	0.45	-0.2
3,135,269	+		Psest_2937	0.77	+0.6
3,135,269	+		Psest_2937	0.77	+0.3
3,135,270	-		Psest_2937	0.77	-0.6
3,135,270	-		Psest_2937	0.77	-0.4
3,135,450	+				+0.3
3,135,598	-				-1.3
3,135,620	-				+1.4
3,135,682	+				+1.0
3,135,682	+				-2.1
3,135,683	-				+2.8
3,135,683	-				-0.5
3,135,683	-				+0.9
3,135,683	-				-3.0
3,135,683	-				+0.2
3,135,683	-				-1.6
3,135,689	-				+0.4
3,135,861	+				-0.3
3,135,993	+		Psest_2938	0.18	+1.3
3,135,993	+		Psest_2938	0.18	-0.4
3,135,993	+		Psest_2938	0.18	-0.1
3,135,993	+		Psest_2938	0.18	-3.1
3,135,993	+		Psest_2938	0.18	-1.1
3,135,994	-		Psest_2938	0.18	-0.0
3,135,994	-		Psest_2938	0.18	+1.1
3,136,188	+		Psest_2938	0.30	+1.6
3,136,188	+		Psest_2938	0.30	-1.1
3,136,189	-		Psest_2938	0.30	-0.9
3,136,189	-		Psest_2938	0.30	-3.3
3,136,189	-		Psest_2938	0.30	-0.8
3,136,189	-		Psest_2938	0.30	-0.8
3,136,189	-		Psest_2938	0.30	+1.4
3,136,411	+		Psest_2938	0.43	+0.8
3,136,412	-		Psest_2938	0.43	+0.9
3,136,424	-		Psest_2938	0.44	+0.8
3,136,425	+		Psest_2938	0.44	-0.0
3,136,425	+		Psest_2938	0.44	-1.1
3,136,425	+		Psest_2938	0.44	+0.6
3,136,425	+		Psest_2938	0.44	+0.3
3,136,425	+		Psest_2938	0.44	+1.8
3,136,425	+		Psest_2938	0.44	+1.2
3,136,425	+		Psest_2938	0.44	-2.7
3,136,425	+		Psest_2938	0.44	-0.5
3,136,425	+		Psest_2938	0.44	+0.4
3,136,425	+		Psest_2938	0.44	-0.4
3,136,426	-		Psest_2938	0.44	+1.1
3,136,426	-		Psest_2938	0.44	+0.7
3,136,426	-		Psest_2938	0.44	+0.7
3,136,426	-		Psest_2938	0.44	+0.6
3,136,426	-		Psest_2938	0.44	+0.4
3,136,426	-		Psest_2938	0.44	-0.8
3,136,426	-		Psest_2938	0.44	+0.9
3,136,426	-		Psest_2938	0.44	-1.0
3,136,426	-		Psest_2938	0.44	-0.7
3,136,426	-		Psest_2938	0.44	-1.0
3,136,452	+		Psest_2938	0.46	-0.7
3,136,452	+		Psest_2938	0.46	-0.7
3,136,452	+		Psest_2938	0.46	-0.4
3,136,453	-		Psest_2938	0.46	-0.3
3,136,767	+		Psest_2938	0.65	-0.7
3,136,767	+		Psest_2938	0.65	-1.3
3,136,767	+		Psest_2938	0.65	-2.4
3,136,767	+		Psest_2938	0.65	-1.8
3,136,767	+		Psest_2938	0.65	+1.1
3,136,767	+		Psest_2938	0.65	+0.3
3,136,767	+		Psest_2938	0.65	+0.7
3,136,767	+		Psest_2938	0.65	-2.6
3,136,767	+		Psest_2938	0.65	+1.9
3,136,767	+		Psest_2938	0.65	-1.4
3,136,767	+		Psest_2938	0.65	-2.0
3,136,767	+		Psest_2938	0.65	-1.0
3,136,767	+		Psest_2938	0.65	+1.6
3,136,767	+		Psest_2938	0.65	+0.3
3,136,767	+		Psest_2938	0.65	-0.4
3,136,767	+		Psest_2938	0.65	+0.4
3,136,767	+		Psest_2938	0.65	+1.4
3,136,767	+		Psest_2938	0.65	-2.1
3,136,767	+		Psest_2938	0.65	+0.2
3,136,768	-		Psest_2938	0.65	+0.9
3,136,768	-		Psest_2938	0.65	-1.2
3,136,768	-		Psest_2938	0.65	-1.0
3,136,768	-		Psest_2938	0.65	+0.6
3,136,768	-		Psest_2938	0.65	+2.5
3,136,768	-		Psest_2938	0.65	-1.3
3,136,768	-		Psest_2938	0.65	-0.8
3,136,768	-		Psest_2938	0.65	-2.0
3,136,768	-		Psest_2938	0.65	-1.4
3,136,806	+		Psest_2938	0.67	-1.3
3,136,806	+		Psest_2938	0.67	-0.1
3,136,806	+		Psest_2938	0.67	-0.1
3,136,806	+		Psest_2938	0.67	+0.3
3,136,806	+		Psest_2938	0.67	+2.4
3,136,806	+		Psest_2938	0.67	-0.8
3,136,806	+		Psest_2938	0.67	+0.8
3,136,806	+		Psest_2938	0.67	-0.3
3,136,806	+		Psest_2938	0.67	-1.8
3,136,806	+		Psest_2938	0.67	+0.7
3,136,807	-		Psest_2938	0.67	-0.8
3,136,807	-		Psest_2938	0.67	-0.9
3,136,807	-		Psest_2938	0.67	-0.3
3,136,807	-		Psest_2938	0.67	-0.0
3,136,807	-		Psest_2938	0.67	-0.8
3,136,807	-		Psest_2938	0.67	-1.8
3,136,807	-		Psest_2938	0.67	+0.3
3,136,807	-		Psest_2938	0.67	-2.3
3,136,809	+		Psest_2938	0.67	+2.2
3,136,809	+		Psest_2938	0.67	-0.5
3,136,810	-		Psest_2938	0.67	+1.1
3,136,870	-		Psest_2938	0.71	+0.6
3,136,870	-		Psest_2938	0.71	-2.4
3,137,034	+		Psest_2938	0.81	-0.7
3,137,034	+		Psest_2938	0.81	-0.1
3,137,160	+		Psest_2938	0.88	-0.8
3,137,161	-		Psest_2938	0.88	+0.4
3,137,161	-		Psest_2938	0.88	+3.2
3,137,161	-		Psest_2938	0.88	-1.1
3,137,163	+		Psest_2938	0.88	-0.6
3,137,163	+		Psest_2938	0.88	-0.3
3,137,164	-		Psest_2938	0.89	+0.2
3,137,164	-		Psest_2938	0.89	-0.5
3,137,164	-		Psest_2938	0.89	-1.3
3,137,253	+				+2.6
3,137,254	-				+0.1
3,137,254	-				+0.4
3,137,254	-				+2.6
3,137,354	+				-0.2
3,137,354	+				+1.2
3,137,420	+		Psest_2939	0.21	-0.9
3,137,420	+		Psest_2939	0.21	+1.3
3,137,420	+		Psest_2939	0.21	-0.4
3,137,420	+		Psest_2939	0.21	-1.0
3,137,421	-		Psest_2939	0.22	-3.0
3,137,421	-		Psest_2939	0.22	-2.7
3,137,421	-		Psest_2939	0.22	-2.4
3,137,421	-		Psest_2939	0.22	+1.9
3,137,421	-		Psest_2939	0.22	-0.2
3,137,421	-		Psest_2939	0.22	-0.4
3,137,556	-		Psest_2939	0.64	-0.0
3,137,556	-		Psest_2939	0.64	-0.4
3,137,636	+				+1.6
3,137,636	+				-0.1
3,137,636	+				-1.4
3,137,637	-				-0.4
3,137,637	-				-3.4
3,137,637	-				+0.9
3,137,637	-				-0.4
3,137,690	+				+1.4
3,137,720	+				-0.3
3,137,831	+				+0.0
3,137,837	+				-0.8
3,137,837	+				+0.6
3,137,838	-				-1.1
3,138,003	+		Psest_2940	0.25	-0.6
3,138,003	+		Psest_2940	0.25	+0.6
3,138,004	-		Psest_2940	0.26	+0.4
3,138,004	-		Psest_2940	0.26	+1.5
3,138,078	+		Psest_2940	0.59	+3.2
3,138,078	+		Psest_2940	0.59	+2.1
3,138,168	+				-0.2
3,138,168	+				-0.6
3,138,168	+				-0.3
3,138,168	+				+1.1
3,138,168	+				-1.6
3,138,168	+				-0.6
3,138,168	+				-0.0
3,138,169	-				+0.4
3,138,169	-				+1.0
3,138,169	-				-0.0
3,138,169	-				-0.4
3,138,340	+				+0.3