Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2013

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
2,129,732	+		Psest_2012	0.14	-0.4
2,129,732	+		Psest_2012	0.14	+1.0
2,129,733	-		Psest_2012	0.14	+0.2
2,129,733	-		Psest_2012	0.14	+0.4
2,129,857	+		Psest_2012	0.25	-2.0
2,129,858	-		Psest_2012	0.25	-0.2
2,130,228	+		Psest_2012	0.59	+2.2
2,130,228	+		Psest_2012	0.59	+0.8
2,130,228	+		Psest_2012	0.59	+0.5
2,130,228	+		Psest_2012	0.59	+0.2
2,130,267	+		Psest_2012	0.62	+0.4
2,130,267	+		Psest_2012	0.62	+1.0
2,130,267	+		Psest_2012	0.62	-1.0
2,130,267	+		Psest_2012	0.62	+0.3
2,130,267	+		Psest_2012	0.62	+0.7
2,130,267	+		Psest_2012	0.62	+0.9
2,130,379	+		Psest_2012	0.73	+0.2
2,130,379	+		Psest_2012	0.73	-1.0
2,130,380	-		Psest_2012	0.73	+0.6
2,130,380	-		Psest_2012	0.73	-2.6
2,130,505	+		Psest_2012	0.84	-1.4
2,130,505	+		Psest_2012	0.84	+0.8
2,130,505	+		Psest_2012	0.84	+0.1
2,130,506	-		Psest_2012	0.84	+4.1
2,130,564	+		Psest_2012	0.89	-0.2
2,130,597	+				+0.7
2,130,783	+				+2.2
2,130,784	-				+0.4
2,130,784	-				+0.4
2,130,821	-				-0.2
2,130,831	-				+0.3
2,130,996	-		Psest_2013	0.15	+0.9
2,131,107	+		Psest_2013	0.21	-0.4
2,131,107	+		Psest_2013	0.21	-0.0
2,131,108	-		Psest_2013	0.21	+1.7
2,131,169	-		Psest_2013	0.24	+0.0
2,131,245	+		Psest_2013	0.28	-0.2
2,131,458	+		Psest_2013	0.38	-1.6
2,131,458	+		Psest_2013	0.38	+0.3
2,131,458	+		Psest_2013	0.38	+0.6
2,131,459	-		Psest_2013	0.38	-0.9
2,131,459	-		Psest_2013	0.38	+2.4
2,131,459	-		Psest_2013	0.38	+0.7
2,131,459	-		Psest_2013	0.38	+0.3
2,131,506	+		Psest_2013	0.41	-0.0
2,131,507	-		Psest_2013	0.41	+0.1
2,131,524	+		Psest_2013	0.42	+0.8
2,131,524	+		Psest_2013	0.42	+0.7
2,131,525	-		Psest_2013	0.42	-2.7
2,131,525	-		Psest_2013	0.42	+1.5
2,131,525	-		Psest_2013	0.42	+0.4
2,131,525	-		Psest_2013	0.42	+0.4
2,131,525	-		Psest_2013	0.42	-1.9
2,131,525	-		Psest_2013	0.42	+1.4
2,131,525	-		Psest_2013	0.42	-0.2
2,131,530	+		Psest_2013	0.42	+0.4
2,131,530	+		Psest_2013	0.42	+0.0
2,131,530	+		Psest_2013	0.42	+0.5
2,131,530	+		Psest_2013	0.42	+2.2
2,131,531	-		Psest_2013	0.42	-1.4
2,131,531	-		Psest_2013	0.42	-1.3
2,131,531	-		Psest_2013	0.42	+0.4
2,131,536	+		Psest_2013	0.42	+0.7
2,131,537	-		Psest_2013	0.42	-1.1
2,131,537	-		Psest_2013	0.42	+1.1
2,131,537	-		Psest_2013	0.42	-0.6
2,131,674	-		Psest_2013	0.49	+0.5
2,131,674	-		Psest_2013	0.49	-1.6
2,131,683	-		Psest_2013	0.50	+0.2
2,131,860	+		Psest_2013	0.58	+0.7
2,131,890	+		Psest_2013	0.60	+1.6
2,131,890	+		Psest_2013	0.60	-0.1
2,131,890	+		Psest_2013	0.60	-0.4
2,131,890	+		Psest_2013	0.60	+0.4
2,131,890	+		Psest_2013	0.60	-1.0
2,131,890	+		Psest_2013	0.60	-0.2
2,131,890	+		Psest_2013	0.60	-0.0
2,131,890	+		Psest_2013	0.60	+0.1
2,131,891	-		Psest_2013	0.60	-0.7
2,131,891	-		Psest_2013	0.60	-1.2
2,131,891	-		Psest_2013	0.60	+0.5
2,131,891	-		Psest_2013	0.60	+0.2
2,131,891	-		Psest_2013	0.60	+0.8
2,131,891	-		Psest_2013	0.60	-0.4
2,131,891	-		Psest_2013	0.60	-2.0
2,131,963	-		Psest_2013	0.64	-0.3
2,132,135	+		Psest_2013	0.72	-1.6
2,132,135	+		Psest_2013	0.72	-2.1
2,132,136	-		Psest_2013	0.72	+0.0
2,132,136	-		Psest_2013	0.72	-1.3
2,132,199	+		Psest_2013	0.75	-0.6
2,132,200	-		Psest_2013	0.75	+1.0
2,132,200	-		Psest_2013	0.75	-0.6
2,132,359	+		Psest_2013	0.83	+0.9
2,132,362	+		Psest_2013	0.84	+0.7
2,132,362	+		Psest_2013	0.84	-1.4
2,132,362	+		Psest_2013	0.84	+0.4
2,132,431	+		Psest_2013	0.87	+0.1
2,132,516	+				+1.2
2,132,517	-				+0.7
2,132,579	+				+0.2
2,132,579	+				+0.5
2,132,579	+				-0.2
2,132,579	+				-0.4
2,132,580	-				+0.8
2,132,793	+				+1.8
2,132,794	-				+0.5
2,132,910	+				-1.3
2,132,945	+				+0.7
2,133,045	-		Psest_2014	0.10	-0.9
2,133,045	-		Psest_2014	0.10	+0.5
2,133,071	+		Psest_2014	0.12	-2.6
2,133,071	+		Psest_2014	0.12	+1.1
2,133,114	-		Psest_2014	0.15	-1.0
2,133,341	+		Psest_2014	0.29	+0.4
2,133,472	+		Psest_2014	0.37	+0.4
2,133,472	+		Psest_2014	0.37	+1.4
2,133,623	+		Psest_2014	0.46	-0.0
2,133,623	+		Psest_2014	0.46	+1.7
2,133,623	+		Psest_2014	0.46	+1.1
2,133,624	-		Psest_2014	0.47	+0.9