Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1994

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
2,110,465	+				-0.2
2,110,465	+				-2.6
2,110,534	+				+0.6
2,110,534	+				-2.4
2,110,534	+				-0.2
2,110,534	+				-1.4
2,110,534	+				+2.1
2,110,534	+				-0.9
2,110,535	-				+0.3
2,110,535	-				+1.3
2,110,535	-				+0.4
2,110,535	-				+0.4
2,110,686	+		Psest_1993	0.35	+0.5
2,110,686	+		Psest_1993	0.35	-0.2
2,110,687	-		Psest_1993	0.35	-2.5
2,110,840	+		Psest_1993	0.63	+1.4
2,110,841	-		Psest_1993	0.63	-3.0
2,110,860	+		Psest_1993	0.66	-0.2
2,110,860	+		Psest_1993	0.66	+1.2
2,110,860	+		Psest_1993	0.66	+1.4
2,110,860	+		Psest_1993	0.66	+1.2
2,110,861	-		Psest_1993	0.66	-1.4
2,110,915	-		Psest_1993	0.76	-0.9
2,110,959	-		Psest_1993	0.84	-0.4
2,110,959	-		Psest_1993	0.84	+0.3
2,111,120	+				+0.2
2,111,120	+				+1.2
2,111,120	+				+1.7
2,111,120	+				-0.6
2,111,120	+				+2.9
2,111,120	+				+0.9
2,111,120	+				-1.6
2,111,120	+				-2.2
2,111,120	+				+2.9
2,111,121	-				+0.4
2,111,121	-				+0.8
2,111,121	-				-0.5
2,111,121	-				+3.8
2,111,121	-				-2.3
2,111,121	-				+0.3
2,111,121	-				-2.0
2,111,121	-				+1.0
2,111,121	-				-2.2
2,111,121	-				+0.1
2,111,121	-				+1.4
2,111,121	-				-0.3
2,111,121	-				+1.7
2,111,121	-				+0.9
2,111,156	+				+2.6
2,111,157	-				-0.1
2,111,157	-				-0.6
2,111,165	+				+2.4
2,111,165	+				-0.2
2,111,166	-				+1.0
2,111,207	+				+2.9
2,111,207	+				-0.3
2,111,245	+				+1.9
2,111,349	+		Psest_1994	0.27	+2.7
2,111,349	+		Psest_1994	0.27	+1.0
2,111,350	-		Psest_1994	0.27	-0.6
2,111,375	-		Psest_1994	0.31	-1.0
2,111,588	+		Psest_1994	0.67	-2.0
2,111,588	+		Psest_1994	0.67	+2.0
2,111,588	+		Psest_1994	0.67	+2.0
2,111,588	+		Psest_1994	0.67	+1.7
2,111,588	+		Psest_1994	0.67	+3.4
2,111,588	+		Psest_1994	0.67	+0.7
2,111,588	+		Psest_1994	0.67	+2.6
2,111,589	-		Psest_1994	0.67	+1.1
2,111,685	+		Psest_1994	0.83	+0.6
2,111,742	+				+2.1
2,111,742	+				-1.0
2,111,742	+				+0.9
2,111,742	+				+1.4
2,111,742	+				+1.3
2,111,742	+				-0.6
2,111,742	+				-1.7
2,111,742	+				+3.9
2,111,742	+				+1.2
2,111,742	+				+3.1
2,111,742	+				+2.7
2,111,743	-				+3.1
2,111,743	-				+1.2
2,111,743	-				+2.8
2,111,743	-				+5.2
2,111,743	-				+1.2
2,111,743	-				+1.4
2,111,743	-				+1.8
2,111,743	-				+5.3
2,111,746	+				+5.3
2,111,746	+				+3.1
2,111,897	+				-2.2
2,111,897	+				+2.5
2,111,934	+				-1.6
2,111,977	-				-1.2
2,112,125	+				-0.6
2,112,126	-				-0.7
2,112,126	-				-2.5
2,112,127	+				-0.3
2,112,128	-				-0.6
2,112,128	-				-1.0
2,112,128	-				+0.6
2,112,128	-				-1.7
2,112,257	+		Psest_1995	0.19	+1.4
2,112,258	-		Psest_1995	0.19	-3.2
2,112,258	-		Psest_1995	0.19	+0.7
2,112,309	+		Psest_1995	0.24	+1.4
2,112,344	+		Psest_1995	0.28	-0.3
2,112,345	-		Psest_1995	0.28	-3.0
2,112,345	-		Psest_1995	0.28	-2.0
2,112,345	-		Psest_1995	0.28	-1.4
2,112,348	+		Psest_1995	0.28	-1.4
2,112,348	+		Psest_1995	0.28	+0.4
2,112,348	+		Psest_1995	0.28	-0.4
2,112,348	+		Psest_1995	0.28	+1.8
2,112,348	+		Psest_1995	0.28	+1.3
2,112,348	+		Psest_1995	0.28	-1.3
2,112,348	+		Psest_1995	0.28	-1.7
2,112,348	+		Psest_1995	0.28	+0.8
2,112,349	-		Psest_1995	0.28	-3.3
2,112,349	-		Psest_1995	0.28	+1.7
2,112,349	-		Psest_1995	0.28	-1.0
2,112,349	-		Psest_1995	0.28	-1.3
2,112,349	-		Psest_1995	0.28	-0.6
2,112,349	-		Psest_1995	0.28	-0.7
2,112,349	-		Psest_1995	0.28	-0.3
2,112,349	-		Psest_1995	0.28	-2.1
2,112,352	-		Psest_1995	0.29	-0.9
2,112,431	-		Psest_1995	0.37	-1.6
2,112,524	+		Psest_1995	0.47	-1.8
2,112,525	-		Psest_1995	0.48	-1.1
2,112,562	-		Psest_1995	0.52	-1.5
2,112,562	-		Psest_1995	0.52	+1.8
2,112,626	+		Psest_1995	0.58	-0.6
2,112,626	+		Psest_1995	0.58	-0.7
2,112,626	+		Psest_1995	0.58	+1.4
2,112,627	-		Psest_1995	0.59	+1.2
2,112,698	+		Psest_1995	0.66	-0.1
2,112,698	+		Psest_1995	0.66	-0.9
2,112,698	+		Psest_1995	0.66	-1.7
2,112,698	+		Psest_1995	0.66	-3.6
2,112,724	+		Psest_1995	0.69	-2.6