Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1963

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
2,078,050	+				+0.8
2,078,088	+		Psest_1963	0.19	+0.2
2,078,197	+		Psest_1963	0.54	+2.4
2,078,290	+		Psest_1963	0.84	+1.2
2,078,290	+		Psest_1963	0.84	+2.2
2,078,291	-		Psest_1963	0.85	+0.4
2,078,291	-		Psest_1963	0.85	+1.6
2,078,349	-				+1.6
2,078,375	+				-2.6
2,078,375	+				-0.7
2,078,375	+				+2.1
2,078,376	-				-0.2
2,078,376	-				+1.0
2,078,376	-				-0.1
2,078,378	+				-3.1
2,078,455	+				+1.9
2,078,456	-				+1.5
2,078,456	-				-2.4
2,078,543	+				+1.4
2,078,598	-		Psest_1964	0.13	-0.5
2,078,598	-		Psest_1964	0.13	+1.5
2,078,598	-		Psest_1964	0.13	+0.4
2,078,608	+		Psest_1964	0.16	+2.3
2,078,609	-		Psest_1964	0.16	+0.5
2,078,609	-		Psest_1964	0.16	-1.3
2,078,702	+		Psest_1964	0.39	+0.4
2,078,702	+		Psest_1964	0.39	-0.3
2,078,702	+		Psest_1964	0.39	-0.4
2,078,703	-		Psest_1964	0.40	+0.5
2,078,703	-		Psest_1964	0.40	+1.4
2,078,703	-		Psest_1964	0.40	+1.1
2,078,703	-		Psest_1964	0.40	+1.7
2,078,703	-		Psest_1964	0.40	+1.5
2,078,775	-		Psest_1964	0.57	+0.2
2,078,863	+		Psest_1964	0.79	-0.9
2,078,961	+				+0.4
2,078,961	+				+0.0
2,078,961	+				+1.4
2,078,962	-				+0.4
2,078,962	-				+1.6
2,078,962	-				+0.7
2,078,962	-				+1.1
2,078,962	-				+0.6
2,078,962	-				-1.9
2,078,962	-				+2.6
2,078,962	-				-1.3
2,078,962	-				-0.6
2,079,007	+				-0.4
2,079,065	+		Psest_1965	0.13	-0.2
2,079,066	-		Psest_1965	0.13	-0.4
2,079,080	+		Psest_1965	0.14	-2.1
2,079,164	+		Psest_1965	0.23	+0.3
2,079,164	+		Psest_1965	0.23	+0.4
2,079,164	+		Psest_1965	0.23	-2.6
2,079,164	+		Psest_1965	0.23	-0.9
2,079,164	+		Psest_1965	0.23	-0.8
2,079,165	-		Psest_1965	0.23	-1.9
2,079,165	-		Psest_1965	0.23	+0.7
2,079,195	+		Psest_1965	0.27	-0.4
2,079,195	+		Psest_1965	0.27	+1.6
2,079,237	-		Psest_1965	0.31	-0.0