Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1920
Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,026,625 | + | Psest_1919 | 0.14 | +0.5 | |
2,026,879 | + | Psest_1919 | 0.44 | +1.2 | |
2,027,083 | + | Psest_1919 | 0.67 | -1.7 | |
2,027,157 | - | Psest_1919 | 0.76 | -0.5 | |
2,027,186 | - | Psest_1919 | 0.79 | -0.0 | |
2,027,479 | - | Psest_1920 | 0.16 | +1.6 | |
2,027,774 | + | -0.4 | |||
2,028,041 | + | Psest_1921 | 0.40 | +0.1 | |
2,028,041 | + | Psest_1921 | 0.40 | -0.5 | |
2,028,041 | + | Psest_1921 | 0.40 | +0.1 | |
2,028,041 | + | Psest_1921 | 0.40 | -2.6 | |
2,028,041 | + | Psest_1921 | 0.40 | +0.2 | |
2,028,042 | - | Psest_1921 | 0.40 | -2.4 | |
2,028,042 | - | Psest_1921 | 0.40 | -2.1 | |
2,028,229 | + | Psest_1921 | 0.62 | +1.0 | |
2,028,230 | - | Psest_1921 | 0.62 | -1.9 | |
2,028,497 | - | -2.5 | |||
2,028,701 | + | -0.4 | |||
2,028,702 | - | -0.9 | |||
2,028,702 | - | -1.8 | |||
2,028,702 | - | +0.5 |
Or see this region's nucleotide sequence