Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1830 and Psest_1831 are separated by 446 nucleotides Psest_1831 and Psest_1832 overlap by 8 nucleotides Psest_1832 and Psest_1833 overlap by 41 nucleotides
Psest_1830: Psest_1830 - Periplasmic protein involved in polysaccharide export, at 1,931,122 to 1,932,222
_1830
Psest_1831: Psest_1831 - bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family, at 1,932,669 to 1,933,436
_1831
Psest_1832: Psest_1832 - Predicted glycosyltransferases, at 1,933,429 to 1,934,304
_1832
Psest_1833: Psest_1833 - hypothetical protein, at 1,934,264 to 1,935,517
_1833
Position (kb)
1932
1933
1934 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1932.382 kb on - strand at 1932.419 kb on - strand at 1932.462 kb on - strand at 1932.462 kb on - strand at 1932.462 kb on - strand at 1932.558 kb on - strand at 1932.660 kb on + strand at 1932.675 kb on - strand at 1932.966 kb on + strand, within Psest_1831 at 1933.267 kb on + strand, within Psest_1831 at 1933.268 kb on - strand, within Psest_1831
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 1,932,382 - +0.2 1,932,419 - -0.4 1,932,462 - +0.1 1,932,462 - +0.4 1,932,462 - +0.2 1,932,558 - -0.8 1,932,660 + +1.0 1,932,675 - +1.8 1,932,966 + Psest_1831 0.39 +1.4 1,933,267 + Psest_1831 0.78 +3.0 1,933,268 - Psest_1831 0.78 -0.2
Or see this region's nucleotide sequence