Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1818

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,916,356	-		Psest_1817	0.15	-0.4
1,916,400	+		Psest_1817	0.19	+1.4
1,916,403	+		Psest_1817	0.19	+2.2
1,916,424	+		Psest_1817	0.21	+0.3
1,916,504	-		Psest_1817	0.28	+1.1
1,916,509	+		Psest_1817	0.28	+0.7
1,916,516	-		Psest_1817	0.29	+2.3
1,916,632	-		Psest_1817	0.39	+0.6
1,916,957	+		Psest_1817	0.68	+0.2
1,917,007	-		Psest_1817	0.72	+2.2
1,917,015	+		Psest_1817	0.73	+0.2
1,917,034	-		Psest_1817	0.74	+0.4
1,917,244	+				-0.6
1,917,338	+				+1.7
1,917,338	+				-1.6
1,917,440	+		Psest_1818	0.10	+3.5
1,917,440	+		Psest_1818	0.10	+0.5
1,917,570	+		Psest_1818	0.22	+1.8
1,917,570	+		Psest_1818	0.22	-0.2
1,917,571	-		Psest_1818	0.22	-0.8
1,917,571	-		Psest_1818	0.22	-0.5
1,917,621	+		Psest_1818	0.27	-0.6
1,917,641	+		Psest_1818	0.28	+3.3
1,917,642	-		Psest_1818	0.28	-2.4
1,917,716	+		Psest_1818	0.35	-0.9
1,917,716	+		Psest_1818	0.35	-0.5
1,917,716	+		Psest_1818	0.35	+2.3
1,917,716	+		Psest_1818	0.35	+0.3
1,917,716	+		Psest_1818	0.35	+0.7
1,917,716	+		Psest_1818	0.35	+1.9
1,917,717	-		Psest_1818	0.35	+1.3
1,917,717	-		Psest_1818	0.35	+1.9
1,917,729	+		Psest_1818	0.36	+0.8
1,917,729	+		Psest_1818	0.36	-0.1
1,917,730	-		Psest_1818	0.36	+2.4
1,917,730	-		Psest_1818	0.36	+1.5
1,917,790	-		Psest_1818	0.42	+1.0
1,917,843	+		Psest_1818	0.46	-0.6
1,917,844	-		Psest_1818	0.46	+0.2
1,917,852	+		Psest_1818	0.47	+1.9
1,917,852	+		Psest_1818	0.47	-0.5
1,917,852	+		Psest_1818	0.47	+1.9
1,917,852	+		Psest_1818	0.47	+0.1
1,917,853	-		Psest_1818	0.47	-0.8
1,917,853	-		Psest_1818	0.47	+3.2
1,917,853	-		Psest_1818	0.47	-1.9
1,917,853	-		Psest_1818	0.47	+0.1
1,917,853	-		Psest_1818	0.47	+1.8
1,917,853	-		Psest_1818	0.47	-1.1
1,917,853	-		Psest_1818	0.47	+3.2
1,917,853	-		Psest_1818	0.47	-0.5
1,917,853	-		Psest_1818	0.47	+0.9
1,917,853	-		Psest_1818	0.47	-0.9
1,917,853	-		Psest_1818	0.47	-0.6
1,917,853	-		Psest_1818	0.47	-1.1
1,917,853	-		Psest_1818	0.47	+1.3
1,917,969	+		Psest_1818	0.58	+0.4
1,917,969	+		Psest_1818	0.58	+0.5
1,917,969	+		Psest_1818	0.58	+0.6
1,917,969	+		Psest_1818	0.58	+2.4
1,917,969	+		Psest_1818	0.58	+0.5
1,917,970	-		Psest_1818	0.58	+2.1
1,917,970	-		Psest_1818	0.58	-0.3
1,917,970	-		Psest_1818	0.58	-2.2
1,917,970	-		Psest_1818	0.58	+1.6
1,917,970	-		Psest_1818	0.58	+0.8
1,918,017	+		Psest_1818	0.62	-0.9
1,918,017	+		Psest_1818	0.62	+0.9
1,918,017	+		Psest_1818	0.62	+1.0
1,918,017	+		Psest_1818	0.62	-1.1
1,918,018	-		Psest_1818	0.62	-0.3
1,918,090	-		Psest_1818	0.68	+0.5
1,918,090	-		Psest_1818	0.68	+3.2
1,918,215	-		Psest_1818	0.80	+2.4
1,918,295	+		Psest_1818	0.87	+1.2
1,918,295	+		Psest_1818	0.87	+2.2
1,918,307	+		Psest_1818	0.88	-3.2
1,918,307	+		Psest_1818	0.88	+2.7
1,918,307	+		Psest_1818	0.88	+0.7
1,918,307	+		Psest_1818	0.88	+0.1
1,918,307	+		Psest_1818	0.88	-1.8
1,918,307	+		Psest_1818	0.88	+2.5
1,918,308	-		Psest_1818	0.88	-0.8
1,918,308	-		Psest_1818	0.88	-0.4
1,918,308	-		Psest_1818	0.88	-1.5
1,918,331	+				-0.6
1,918,331	+				-0.4
1,918,332	-				+2.4
1,918,420	+				-1.3
1,918,427	-				-0.5
1,918,470	+				+0.1
1,918,470	+				-0.1
1,918,470	+				+1.1
1,918,470	+				-1.6
1,918,470	+				+2.0
1,918,471	-				+2.5
1,918,471	-				+2.4
1,918,471	-				+3.1
1,918,471	-				+1.7
1,918,471	-				+2.0
1,918,471	-				-1.9
1,918,471	-				+0.8
1,918,471	-				+2.5
1,918,544	-		Psest_1819	0.10	+0.6
1,918,553	-		Psest_1819	0.11	+3.3
1,918,631	+		Psest_1819	0.19	+2.1
1,918,631	+		Psest_1819	0.19	+2.1
1,918,632	-		Psest_1819	0.19	+1.5
1,918,632	-		Psest_1819	0.19	-1.1
1,918,632	-		Psest_1819	0.19	+3.1
1,918,632	-		Psest_1819	0.19	+2.8
1,918,635	+		Psest_1819	0.19	+2.0
1,918,659	+		Psest_1819	0.22	+0.5
1,918,660	-		Psest_1819	0.22	-0.4
1,918,672	+		Psest_1819	0.23	+0.1
1,918,672	+		Psest_1819	0.23	+2.9
1,918,672	+		Psest_1819	0.23	+1.3
1,918,672	+		Psest_1819	0.23	+1.4
1,918,695	-		Psest_1819	0.26	+1.7
1,918,695	-		Psest_1819	0.26	+1.0
1,918,785	-		Psest_1819	0.35	+1.0
1,918,785	-		Psest_1819	0.35	+2.5
1,918,785	-		Psest_1819	0.35	+1.4
1,918,865	-		Psest_1819	0.43	+1.7
1,918,901	+		Psest_1819	0.47	-1.6
1,918,901	+		Psest_1819	0.47	+1.2
1,918,902	-		Psest_1819	0.47	+0.9
1,918,902	-		Psest_1819	0.47	+3.3
1,918,902	-		Psest_1819	0.47	+2.5
1,918,950	+		Psest_1819	0.52	+2.4
1,918,950	+		Psest_1819	0.52	+0.7
1,918,950	+		Psest_1819	0.52	+3.3
1,918,950	+		Psest_1819	0.52	+2.6
1,918,950	+		Psest_1819	0.52	-0.4
1,918,950	+		Psest_1819	0.52	+3.1
1,918,950	+		Psest_1819	0.52	-0.3
1,918,950	+		Psest_1819	0.52	+0.8
1,918,950	+		Psest_1819	0.52	+1.0
1,918,950	+		Psest_1819	0.52	+2.1
1,918,950	+		Psest_1819	0.52	+0.4
1,918,950	+		Psest_1819	0.52	+0.5
1,918,950	+		Psest_1819	0.52	+3.2
1,918,950	+		Psest_1819	0.52	+3.4
1,918,950	+		Psest_1819	0.52	+1.6
1,918,950	+		Psest_1819	0.52	+1.4
1,918,950	+		Psest_1819	0.52	-0.8
1,918,950	+		Psest_1819	0.52	+1.3
1,918,950	+		Psest_1819	0.52	+0.9
1,918,950	+		Psest_1819	0.52	+0.6
1,918,950	+		Psest_1819	0.52	+1.0
1,918,950	+		Psest_1819	0.52	+1.0
1,918,950	+		Psest_1819	0.52	+1.9
1,918,950	+		Psest_1819	0.52	-1.7
1,918,950	+		Psest_1819	0.52	+3.2
1,918,950	+		Psest_1819	0.52	+2.4
1,918,950	+		Psest_1819	0.52	+0.1
1,918,950	+		Psest_1819	0.52	+0.7
1,918,950	+		Psest_1819	0.52	+0.9
1,918,950	+		Psest_1819	0.52	+1.6
1,918,950	+		Psest_1819	0.52	+1.4
1,918,950	+		Psest_1819	0.52	+0.9
1,918,950	+		Psest_1819	0.52	+0.3
1,918,950	+		Psest_1819	0.52	+2.8
1,918,950	+		Psest_1819	0.52	+1.8
1,918,950	+		Psest_1819	0.52	+0.8
1,918,950	+		Psest_1819	0.52	+0.3
1,918,951	-		Psest_1819	0.52	+2.3
1,918,951	-		Psest_1819	0.52	-0.2
1,918,951	-		Psest_1819	0.52	+0.8
1,918,951	-		Psest_1819	0.52	+2.9
1,918,951	-		Psest_1819	0.52	+0.4
1,918,951	-		Psest_1819	0.52	+1.3
1,918,951	-		Psest_1819	0.52	+0.3
1,918,951	-		Psest_1819	0.52	+1.3
1,918,951	-		Psest_1819	0.52	+1.3
1,918,951	-		Psest_1819	0.52	+1.7
1,918,951	-		Psest_1819	0.52	+2.8
1,918,951	-		Psest_1819	0.52	+1.5
1,918,951	-		Psest_1819	0.52	-0.2
1,918,951	-		Psest_1819	0.52	-0.6
1,918,951	-		Psest_1819	0.52	+2.7
1,918,951	-		Psest_1819	0.52	+2.3
1,918,951	-		Psest_1819	0.52	+0.1
1,918,951	-		Psest_1819	0.52	+2.3
1,918,951	-		Psest_1819	0.52	+1.8
1,918,951	-		Psest_1819	0.52	-0.8
1,918,951	-		Psest_1819	0.52	+1.2
1,918,951	-		Psest_1819	0.52	+2.6
1,918,951	-		Psest_1819	0.52	+1.7
1,918,951	-		Psest_1819	0.52	+2.6
1,918,951	-		Psest_1819	0.52	+3.2
1,918,951	-		Psest_1819	0.52	+0.8
1,918,951	-		Psest_1819	0.52	-0.0
1,918,951	-		Psest_1819	0.52	-1.4
1,918,951	-		Psest_1819	0.52	+2.1
1,918,951	-		Psest_1819	0.52	+1.4
1,918,951	-		Psest_1819	0.52	+0.2
1,918,951	-		Psest_1819	0.52	-0.3
1,918,951	-		Psest_1819	0.52	+1.3
1,918,951	-		Psest_1819	0.52	-0.2
1,918,951	-		Psest_1819	0.52	+1.4
1,918,951	-		Psest_1819	0.52	+1.5
1,918,951	-		Psest_1819	0.52	+0.1
1,918,951	-		Psest_1819	0.52	+0.5
1,918,951	-		Psest_1819	0.52	-0.4
1,918,951	-		Psest_1819	0.52	+0.9
1,918,951	-		Psest_1819	0.52	+0.0
1,918,951	-		Psest_1819	0.52	+2.2
1,918,951	-		Psest_1819	0.52	+1.6
1,918,951	-		Psest_1819	0.52	+2.5
1,918,951	-		Psest_1819	0.52	+1.2
1,918,951	-		Psest_1819	0.52	+0.4
1,918,951	-		Psest_1819	0.52	+2.0
1,918,951	-		Psest_1819	0.52	+1.6
1,918,951	-		Psest_1819	0.52	-0.2
1,918,951	-		Psest_1819	0.52	+0.9
1,918,951	-		Psest_1819	0.52	+1.1
1,918,951	-		Psest_1819	0.52	+2.1
1,918,951	-		Psest_1819	0.52	+3.3
1,918,951	-		Psest_1819	0.52	+0.9
1,918,951	-		Psest_1819	0.52	+2.3
1,918,951	-		Psest_1819	0.52	+1.7
1,918,952	+		Psest_1819	0.52	+2.4
1,918,953	-		Psest_1819	0.52	+1.6
1,918,953	-		Psest_1819	0.52	+1.7
1,919,069	-		Psest_1819	0.64	+2.0
1,919,148	-		Psest_1819	0.72	+4.4
1,919,148	-		Psest_1819	0.72	+2.9
1,919,182	+		Psest_1819	0.75	+0.1
1,919,182	+		Psest_1819	0.75	+1.1
1,919,182	+		Psest_1819	0.75	+2.1
1,919,183	-		Psest_1819	0.75	+3.1
1,919,183	-		Psest_1819	0.75	+0.6
1,919,183	-		Psest_1819	0.75	+1.8
1,919,210	-		Psest_1819	0.78	+2.4
1,919,378	+				+2.3
1,919,387	+				+2.8
1,919,387	+				+1.1
1,919,387	+				+3.7
1,919,387	+				+1.1
1,919,387	+				+4.9
1,919,387	+				+1.5
1,919,388	-				+1.8
1,919,388	-				+1.9
1,919,388	-				+2.1
1,919,388	-				+3.9
1,919,388	-				+1.7
1,919,388	-				+2.9
1,919,388	-				+2.6
1,919,388	-				+0.3
1,919,388	-				+3.8