Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1614

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,716,882	+		Psest_1612	0.72	+0.7
1,716,883	-		Psest_1612	0.73	+0.2
1,716,883	-		Psest_1612	0.73	-0.6
1,717,175	+				+0.3
1,717,175	+				-0.1
1,717,175	+				-0.7
1,717,176	-				+1.1
1,717,176	-				-1.1
1,717,196	+				-0.1
1,717,197	-				+0.2
1,717,197	-				-2.8
1,717,197	-				-1.4
1,717,197	-				+4.4
1,717,197	-				-0.8
1,717,200	+				-1.9
1,717,200	+				-0.7
1,717,200	+				+0.5
1,717,200	+				-0.8
1,717,200	+				+2.4
1,717,200	+				-0.1
1,717,200	+				+0.3
1,717,200	+				+1.3
1,717,200	+				+0.5
1,717,201	-				+0.0
1,717,201	-				-0.1
1,717,201	-				+2.3
1,717,201	-				-0.3
1,717,201	-				-1.8
1,717,201	-				-1.0
1,717,201	-				+0.5
1,717,201	-				+0.3
1,717,201	-				+2.9
1,717,201	-				+0.9
1,717,201	-				+1.9
1,717,244	+		Psest_1613	0.15	+0.4
1,717,244	+		Psest_1613	0.15	+1.4
1,717,244	+		Psest_1613	0.15	+0.1
1,717,244	+		Psest_1613	0.15	-1.1
1,717,244	+		Psest_1613	0.15	-0.6
1,717,245	-		Psest_1613	0.15	+1.4
1,717,245	-		Psest_1613	0.15	-2.7
1,717,259	+		Psest_1613	0.17	+0.6
1,717,304	-		Psest_1613	0.23	-1.7
1,717,304	-		Psest_1613	0.23	-2.6
1,717,313	+		Psest_1613	0.25	-0.8
1,717,499	+		Psest_1613	0.50	-0.7
1,717,500	-		Psest_1613	0.50	-0.7
1,717,793	+				+1.5
1,717,794	-				+0.2
1,717,794	-				-1.0
1,717,874	+				+0.1
1,717,874	+				-2.8
1,717,874	+				-2.3
1,717,875	-				+2.9
1,717,875	-				+2.7
1,717,890	+				+0.2
1,717,890	+				+0.2
1,717,999	-				+0.7
1,718,067	+		Psest_1614	0.10	-1.2
1,718,105	+		Psest_1614	0.13	-0.6
1,718,105	+		Psest_1614	0.13	-3.1
1,718,109	+		Psest_1614	0.13	+0.3
1,718,109	+		Psest_1614	0.13	+0.9
1,718,142	+		Psest_1614	0.15	-0.5
1,718,271	+		Psest_1614	0.22	-0.7
1,718,271	+		Psest_1614	0.22	-0.8
1,718,271	+		Psest_1614	0.22	-0.5
1,718,271	+		Psest_1614	0.22	-1.1
1,718,272	-		Psest_1614	0.22	-0.8
1,718,272	-		Psest_1614	0.22	-0.8
1,718,272	-		Psest_1614	0.22	-1.7
1,718,272	-		Psest_1614	0.22	+1.1
1,718,555	-		Psest_1614	0.37	-1.4
1,718,602	+		Psest_1614	0.40	+0.8
1,718,603	-		Psest_1614	0.40	+0.2
1,718,604	+		Psest_1614	0.40	-0.1
1,718,605	-		Psest_1614	0.40	+1.7
1,718,605	-		Psest_1614	0.40	-1.3
1,718,605	-		Psest_1614	0.40	+0.8
1,718,793	+		Psest_1614	0.50	-0.1
1,719,079	-		Psest_1614	0.66	-0.8
1,719,080	+		Psest_1614	0.66	-2.8
1,719,080	+		Psest_1614	0.66	-0.2
1,719,200	+		Psest_1614	0.72	+1.0
1,719,200	+		Psest_1614	0.72	-0.4
1,719,201	-		Psest_1614	0.72	-0.3
1,719,201	-		Psest_1614	0.72	-1.6
1,719,801	+				-0.1
1,719,802	-				-1.6
1,719,802	-				+0.2
1,719,802	-				+1.9
1,719,803	+				-0.3
1,719,804	-				-0.7
1,719,867	-				-0.6
1,719,913	-				-0.3
1,720,173	+				-2.8
1,720,184	+				+0.8
1,720,203	+				+0.1
1,720,571	+				-0.1
1,720,571	+				-0.4
1,720,571	+				-0.8
1,720,571	+				-3.1
1,720,572	-				-0.8
1,720,572	-				-0.3
1,720,572	-				-1.5
1,720,572	-				-1.1
1,720,609	+				+1.7
1,720,609	+				-0.1
1,720,609	+				+1.1
1,720,609	+				+1.1
1,720,609	+				-0.2
1,720,609	+				-0.8
1,720,610	-				+0.4
1,720,610	-				+0.3
1,720,610	-				+2.0
1,720,610	-				-2.9
1,720,610	-				+0.5
1,720,610	-				+0.5
1,720,610	-				+1.0
1,720,610	-				+0.5
1,720,610	-				-0.1
1,720,610	-				-0.8
1,720,610	-				+0.1
1,720,610	-				-0.8
1,720,656	+				+0.0
1,720,656	+				+0.9
1,720,657	-				+0.9
1,720,680	+				-1.3