Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1542

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,640,528	+		Psest_1541	0.21	-2.5
1,640,528	+		Psest_1541	0.21	+2.0
1,640,552	+		Psest_1541	0.25	+2.5
1,640,706	+		Psest_1541	0.46	-0.5
1,640,706	+		Psest_1541	0.46	-0.8
1,640,706	+		Psest_1541	0.46	-0.0
1,640,707	-		Psest_1541	0.46	-0.8
1,640,707	-		Psest_1541	0.46	-1.6
1,640,914	-		Psest_1541	0.76	+0.4
1,640,934	+		Psest_1541	0.79	+1.0
1,640,934	+		Psest_1541	0.79	-0.6
1,640,935	-		Psest_1541	0.79	+1.0
1,640,935	-		Psest_1541	0.79	+1.1
1,640,951	+		Psest_1541	0.81	+0.6
1,640,951	+		Psest_1541	0.81	-2.5
1,640,951	+		Psest_1541	0.81	-1.0
1,640,951	+		Psest_1541	0.81	-1.3
1,640,951	+		Psest_1541	0.81	-0.0
1,640,952	-		Psest_1541	0.81	+0.2
1,640,952	-		Psest_1541	0.81	+0.3
1,640,952	-		Psest_1541	0.81	-1.0
1,640,952	-		Psest_1541	0.81	-0.1
1,640,952	-		Psest_1541	0.81	-1.6
1,640,952	-		Psest_1541	0.81	-0.0
1,640,952	-		Psest_1541	0.81	+1.1
1,640,952	-		Psest_1541	0.81	-3.7
1,640,954	+		Psest_1541	0.81	-1.8
1,640,954	+		Psest_1541	0.81	+2.1
1,640,954	+		Psest_1541	0.81	-1.3
1,640,955	-		Psest_1541	0.81	+0.3
1,641,010	+		Psest_1541	0.89	+1.7
1,641,010	+		Psest_1541	0.89	-1.6
1,641,011	-		Psest_1541	0.89	-2.6
1,641,011	-		Psest_1541	0.89	+0.5
1,641,011	-		Psest_1541	0.89	-0.9
1,641,312	-		Psest_1542	0.31	+1.2
1,641,328	+		Psest_1542	0.33	+1.5
1,641,328	+		Psest_1542	0.33	+1.6
1,641,328	+		Psest_1542	0.33	+0.5
1,641,328	+		Psest_1542	0.33	+1.0
1,641,328	+		Psest_1542	0.33	-0.5
1,641,328	+		Psest_1542	0.33	-2.6
1,641,329	-		Psest_1542	0.33	-2.3
1,641,329	-		Psest_1542	0.33	+0.5
1,641,485	+		Psest_1542	0.54	+2.0
1,641,485	+		Psest_1542	0.54	+1.4
1,641,485	+		Psest_1542	0.54	-2.6
1,641,486	-		Psest_1542	0.54	-0.6
1,641,486	-		Psest_1542	0.54	+1.8
1,641,510	-		Psest_1542	0.57	+1.5
1,641,654	+		Psest_1542	0.76	-1.0
1,641,817	+				-0.6
1,641,818	-				-0.1
1,641,818	-				+4.2
1,641,818	-				-2.3
1,641,820	+				+1.5
1,641,820	+				-0.5
1,641,820	+				+0.8
1,641,821	-				-0.0
1,641,881	+				+0.2
1,641,881	+				+0.9
1,641,892	+				-1.2
1,641,897	+				-2.9
1,641,898	-				+0.5
1,641,904	-				+0.7
1,641,904	-				+1.9
1,641,930	+				-0.5
1,641,930	+				+1.1
1,641,931	-				+2.8
1,641,953	+				-0.5
1,641,954	-				-2.9
1,642,290	+		Psest_1543	0.53	-2.3
1,642,290	+		Psest_1543	0.53	-1.0
1,642,290	+		Psest_1543	0.53	-0.7
1,642,291	-		Psest_1543	0.53	-1.1
1,642,291	-		Psest_1543	0.53	-1.3
1,642,291	-		Psest_1543	0.53	+0.6
1,642,356	+		Psest_1543	0.65	-0.0
1,642,357	-		Psest_1543	0.66	+1.7
1,642,503	+				+0.3
1,642,504	-				-0.0
1,642,504	-				-0.3
1,642,570	+				-0.9
1,642,704	-				+1.0
1,642,704	-				-0.5
1,642,705	+				-0.7
1,642,705	+				-1.6
1,642,705	+				-1.5
1,642,705	+				-0.4
1,642,705	+				+1.5
1,642,705	+				+1.9
1,642,705	+				-0.4
1,642,706	-				+0.9
1,642,706	-				-0.7
1,642,706	-				+2.1
1,642,706	-				+0.5
1,642,706	-				-0.1
1,642,821	+		Psest_1544	0.15	+2.5
1,642,821	+		Psest_1544	0.15	+2.9
1,642,822	-		Psest_1544	0.15	-0.1
1,642,827	+		Psest_1544	0.15	-0.5
1,642,827	+		Psest_1544	0.15	-0.1
1,642,827	+		Psest_1544	0.15	-1.0
1,642,827	+		Psest_1544	0.15	+2.5
1,642,827	+		Psest_1544	0.15	+0.4
1,642,828	-		Psest_1544	0.15	-1.6
1,642,828	-		Psest_1544	0.15	+0.8
1,642,828	-		Psest_1544	0.15	+1.9
1,642,828	-		Psest_1544	0.15	+1.9