Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1510

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
1,608,882	-		Psest_1509	0.14	-1.5
1,608,882	-		Psest_1509	0.14	-2.3
1,608,882	-		Psest_1509	0.14	-0.5
1,608,882	-		Psest_1509	0.14	-0.2
1,608,884	+		Psest_1509	0.14	-0.9
1,608,885	-		Psest_1509	0.14	-1.1
1,608,885	-		Psest_1509	0.14	-2.2
1,608,885	-		Psest_1509	0.14	-2.4
1,609,154	+		Psest_1509	0.39	-1.0
1,609,155	-		Psest_1509	0.39	+1.4
1,609,155	-		Psest_1509	0.39	-1.1
1,609,155	-		Psest_1509	0.39	-0.3
1,609,289	+		Psest_1509	0.52	-2.2
1,609,289	+		Psest_1509	0.52	-1.7
1,609,289	+		Psest_1509	0.52	+0.4
1,609,290	-		Psest_1509	0.52	-0.0
1,609,290	-		Psest_1509	0.52	-0.9
1,609,290	-		Psest_1509	0.52	-0.6
1,609,541	+		Psest_1509	0.76	+0.2
1,609,541	+		Psest_1509	0.76	-0.6
1,609,541	+		Psest_1509	0.76	+0.0
1,609,541	+		Psest_1509	0.76	-1.3
1,609,542	-		Psest_1509	0.76	-2.0
1,609,542	-		Psest_1509	0.76	+0.5
1,609,967	+				-0.2
1,609,989	-		Psest_1510	0.11	+2.2
1,609,989	-		Psest_1510	0.11	+1.5
1,610,140	+		Psest_1510	0.21	+2.4
1,610,141	-		Psest_1510	0.21	-0.8
1,610,141	-		Psest_1510	0.21	-0.6
1,610,141	-		Psest_1510	0.21	+0.5
1,610,141	-		Psest_1510	0.21	+1.0
1,610,169	-		Psest_1510	0.23	-0.0
1,610,264	+		Psest_1510	0.30	+1.5
1,610,264	+		Psest_1510	0.30	+2.5
1,610,264	+		Psest_1510	0.30	-0.0
1,610,264	+		Psest_1510	0.30	-0.8
1,610,265	-		Psest_1510	0.30	-0.3
1,610,265	-		Psest_1510	0.30	+1.5
1,611,072	-		Psest_1510	0.86	-1.6
1,611,072	-		Psest_1510	0.86	+2.6
1,611,072	-		Psest_1510	0.86	+0.8
1,611,142	+				-0.6
1,611,142	+				+2.1
1,611,143	-				-0.8
1,611,143	-				-0.0
1,611,288	+				+2.3
1,611,302	+				-1.3
1,611,302	+				+2.2
1,611,342	+				+0.3
1,611,342	+				-0.0
1,611,342	+				+0.4
1,611,342	+				-1.6
1,611,342	+				-0.8
1,611,342	+				+0.6
1,611,342	+				+1.2
1,611,342	+				+0.1
1,611,342	+				+1.1
1,611,342	+				+2.5
1,611,342	+				-1.9
1,611,342	+				-0.7
1,611,342	+				-0.3
1,611,342	+				-0.2
1,611,343	-				+1.4
1,611,343	-				+2.1
1,611,343	-				-1.0
1,611,343	-				-0.3
1,611,343	-				-0.3
1,611,343	-				-0.8
1,611,346	+				+1.2
1,611,347	-				+0.9
1,611,347	-				+0.0
1,611,347	-				-1.3
1,611,406	+		Psest_1511	0.11	-0.0
1,611,407	-		Psest_1511	0.12	+0.1
1,611,407	-		Psest_1511	0.12	-0.6
1,611,421	+		Psest_1511	0.17	+1.3
1,611,422	-		Psest_1511	0.17	+0.3
1,611,422	-		Psest_1511	0.17	+1.2
1,611,422	-		Psest_1511	0.17	-1.0
1,611,422	-		Psest_1511	0.17	+0.2
1,611,422	-		Psest_1511	0.17	+0.1
1,611,422	-		Psest_1511	0.17	+2.1
1,611,422	-		Psest_1511	0.17	-0.2
1,611,422	-		Psest_1511	0.17	+1.4
1,611,604	-				-0.0
1,611,609	+				-0.9
1,611,648	+				+2.2
1,611,648	+				+1.1
1,611,648	+				+1.1
1,611,648	+				-0.5
1,611,649	-				-1.0
1,611,649	-				+0.1
1,611,649	-				+2.7
1,611,661	+				+0.1
1,611,661	+				+0.9
1,611,661	+				-0.0
1,611,661	+				-0.0
1,611,684	+				+0.2
1,611,685	-				-2.5
1,612,039	+		Psest_1512	0.36	-1.5
1,612,039	+		Psest_1512	0.36	-0.9
1,612,040	-		Psest_1512	0.36	-2.0
1,612,143	+		Psest_1512	0.46	-0.5
1,612,143	+		Psest_1512	0.46	+1.5
1,612,143	+		Psest_1512	0.46	+0.6
1,612,144	-		Psest_1512	0.46	-0.2
1,612,144	-		Psest_1512	0.46	-1.0
1,612,144	-		Psest_1512	0.46	-0.2