Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1360 and Psest_1361 overlap by 4 nucleotides Psest_1361 and Psest_1362 overlap by 8 nucleotides Psest_1362 and Psest_1363 are separated by 7 nucleotides
Psest_1360: Psest_1360 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 1,470,176 to 1,471,153
_1360
Psest_1361: Psest_1361 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 1,471,150 to 1,471,911
_1361
Psest_1362: Psest_1362 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 1,471,904 to 1,472,548
_1362
Psest_1363: Psest_1363 - Predicted membrane protein, at 1,472,556 to 1,473,821
_1363
Position (kb)
1471
1472
1473 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1471.474 kb on + strand, within Psest_1361 at 1471.474 kb on + strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.475 kb on - strand, within Psest_1361 at 1471.764 kb on + strand, within Psest_1361 at 1471.764 kb on + strand, within Psest_1361 at 1471.764 kb on + strand, within Psest_1361 at 1471.804 kb on + strand, within Psest_1361 at 1472.635 kb on + strand at 1472.635 kb on + strand at 1472.635 kb on + strand at 1472.636 kb on - strand at 1472.636 kb on - strand at 1472.636 kb on - strand at 1472.636 kb on - strand at 1472.716 kb on + strand, within Psest_1363 at 1472.716 kb on + strand, within Psest_1363 at 1472.716 kb on + strand, within Psest_1363 at 1472.716 kb on + strand, within Psest_1363 at 1472.716 kb on + strand, within Psest_1363 at 1472.717 kb on - strand, within Psest_1363 at 1472.717 kb on - strand, within Psest_1363 at 1472.717 kb on - strand, within Psest_1363 at 1473.016 kb on + strand, within Psest_1363 at 1473.016 kb on + strand, within Psest_1363 at 1473.016 kb on + strand, within Psest_1363 at 1473.016 kb on + strand, within Psest_1363 at 1473.016 kb on + strand, within Psest_1363 at 1473.017 kb on - strand, within Psest_1363 at 1473.017 kb on - strand, within Psest_1363
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 1,471,474 + Psest_1361 0.43 -0.2 1,471,474 + Psest_1361 0.43 +0.8 1,471,475 - Psest_1361 0.43 +0.7 1,471,475 - Psest_1361 0.43 +0.6 1,471,475 - Psest_1361 0.43 -2.8 1,471,475 - Psest_1361 0.43 -0.6 1,471,475 - Psest_1361 0.43 +2.0 1,471,475 - Psest_1361 0.43 -0.1 1,471,764 + Psest_1361 0.81 -1.4 1,471,764 + Psest_1361 0.81 +2.3 1,471,764 + Psest_1361 0.81 +1.9 1,471,804 + Psest_1361 0.86 -1.4 1,472,635 + +0.4 1,472,635 + -1.0 1,472,635 + -0.9 1,472,636 - -1.7 1,472,636 - +0.6 1,472,636 - +0.5 1,472,636 - +1.0 1,472,716 + Psest_1363 0.13 +0.3 1,472,716 + Psest_1363 0.13 +1.1 1,472,716 + Psest_1363 0.13 -0.3 1,472,716 + Psest_1363 0.13 -0.3 1,472,716 + Psest_1363 0.13 +2.0 1,472,717 - Psest_1363 0.13 -1.1 1,472,717 - Psest_1363 0.13 +0.7 1,472,717 - Psest_1363 0.13 +1.8 1,473,016 + Psest_1363 0.36 -1.3 1,473,016 + Psest_1363 0.36 +1.3 1,473,016 + Psest_1363 0.36 +0.1 1,473,016 + Psest_1363 0.36 +1.3 1,473,016 + Psest_1363 0.36 -0.3 1,473,017 - Psest_1363 0.36 +1.4 1,473,017 - Psest_1363 0.36 +0.3
Or see this region's nucleotide sequence