Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0117

Experiment: D-Cycloserine 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.032 mg/ml
113,384	+		Psest_0115	0.78	-0.8
113,448	+				+1.1
113,449	-				-0.1
113,484	-				+0.0
113,563	+		Psest_0116	0.12	-0.9
113,563	+		Psest_0116	0.12	+1.1
113,563	+		Psest_0116	0.12	-0.4
113,563	+		Psest_0116	0.12	+2.2
113,563	+		Psest_0116	0.12	+1.6
113,563	+		Psest_0116	0.12	+1.6
113,564	-		Psest_0116	0.12	+2.1
113,564	-		Psest_0116	0.12	+0.2
113,564	-		Psest_0116	0.12	-0.0
113,564	-		Psest_0116	0.12	+1.3
113,564	-		Psest_0116	0.12	+1.0
113,564	-		Psest_0116	0.12	+1.3
113,564	-		Psest_0116	0.12	-0.7
113,564	-		Psest_0116	0.12	+0.6
113,767	+		Psest_0116	0.37	-1.2
113,767	+		Psest_0116	0.37	-1.3
113,767	+		Psest_0116	0.37	-0.7
113,767	+		Psest_0116	0.37	-1.8
113,767	+		Psest_0116	0.37	+0.4
113,767	+		Psest_0116	0.37	-1.3
113,768	-		Psest_0116	0.37	+1.7
113,768	-		Psest_0116	0.37	-0.2
113,768	-		Psest_0116	0.37	-0.8
113,768	-		Psest_0116	0.37	+1.5
113,768	-		Psest_0116	0.37	+3.6
113,768	-		Psest_0116	0.37	-0.5
113,768	-		Psest_0116	0.37	+0.0
113,888	-		Psest_0116	0.52	-1.0
113,888	-		Psest_0116	0.52	-1.0
114,505	-		Psest_0117	0.28	+0.0
114,505	-		Psest_0117	0.28	+0.7
114,505	-		Psest_0117	0.28	-0.1
114,547	-		Psest_0117	0.33	-0.0
114,603	+		Psest_0117	0.40	-0.1
114,604	-		Psest_0117	0.40	+0.5
114,604	-		Psest_0117	0.40	+0.8
114,777	+		Psest_0117	0.62	-1.0
114,778	-		Psest_0117	0.62	-1.0
114,778	-		Psest_0117	0.62	-1.8
114,778	-		Psest_0117	0.62	+0.1
114,778	-		Psest_0117	0.62	-1.3
114,778	-		Psest_0117	0.62	+0.2
114,907	+		Psest_0117	0.79	+0.2
114,907	+		Psest_0117	0.79	-0.5
114,907	+		Psest_0117	0.79	-2.5
114,907	+		Psest_0117	0.79	+1.2
114,907	+		Psest_0117	0.79	-0.7
114,908	-		Psest_0117	0.79	-0.8
114,908	-		Psest_0117	0.79	-0.7
114,908	-		Psest_0117	0.79	+0.1
114,908	-		Psest_0117	0.79	-2.9
114,908	-		Psest_0117	0.79	-1.7
114,908	-		Psest_0117	0.79	+0.7
115,325	+		Psest_0118	0.55	+0.7
115,325	+		Psest_0118	0.55	-2.1
115,325	+		Psest_0118	0.55	-0.4
115,325	+		Psest_0118	0.55	-2.0
115,325	+		Psest_0118	0.55	+0.0
115,326	-		Psest_0118	0.55	+1.3
115,326	-		Psest_0118	0.55	-1.4
115,326	-		Psest_0118	0.55	+2.2
115,326	-		Psest_0118	0.55	+0.9
115,326	-		Psest_0118	0.55	+1.2
115,326	-		Psest_0118	0.55	-1.4
115,326	-		Psest_0118	0.55	+1.7
115,326	-		Psest_0118	0.55	-1.1
115,473	+		Psest_0118	0.87	-0.3
115,474	-		Psest_0118	0.87	-0.4
115,474	-		Psest_0118	0.87	+2.6
115,474	-		Psest_0118	0.87	-1.2
115,650	+		Psest_0119	0.45	+2.2
115,650	+		Psest_0119	0.45	+1.5
115,651	-		Psest_0119	0.46	-2.9
115,651	-		Psest_0119	0.46	-3.3
115,651	-		Psest_0119	0.46	+1.7
115,834	-				-2.9
115,907	-				+0.8
115,907	-				+0.1
115,907	-				-0.7
115,907	-				-2.0
115,907	-				+1.3
115,907	-				+1.3
115,907	-				+0.2
115,907	-				+2.5
115,933	-				-0.7
115,933	-				+0.8
115,933	-				-0.6
115,933	-				-0.3
115,933	-				+0.7
115,985	-				+0.1
115,985	-				+2.3
115,988	-				-0.1
115,991	+				-0.8
116,026	+		Psest_0120	0.14	+0.1
116,065	-		Psest_0120	0.26	-0.1