Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4154

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,335,068	+				-1.9
4,335,207	+		Psest_4152	0.31	+1.2
4,335,207	+		Psest_4152	0.31	-0.6
4,335,207	+		Psest_4152	0.31	-0.9
4,335,207	+		Psest_4152	0.31	+0.6
4,335,207	+		Psest_4152	0.31	+0.9
4,335,207	+		Psest_4152	0.31	+1.4
4,335,208	-		Psest_4152	0.31	-1.3
4,335,213	+		Psest_4152	0.32	-0.4
4,335,213	+		Psest_4152	0.32	+0.9
4,335,214	-		Psest_4152	0.33	-0.5
4,335,288	-		Psest_4152	0.50	+0.5
4,335,346	-		Psest_4152	0.63	-0.4
4,335,483	+				-0.7
4,335,483	+				+0.1
4,335,483	+				-1.4
4,335,484	-				+0.9
4,335,484	-				-0.1
4,335,859	+				+0.2
4,335,860	-				-0.2
4,335,861	+				+0.5
4,335,861	+				+0.2
4,335,861	+				-0.1
4,335,862	-				-0.6
4,335,862	-				-1.5
4,335,946	+				-0.4
4,335,946	+				-0.9
4,335,947	-				-0.2
4,336,049	+		Psest_4154	0.11	-2.2
4,336,049	+		Psest_4154	0.11	-0.4
4,336,049	+		Psest_4154	0.11	-1.2
4,336,049	+		Psest_4154	0.11	-0.1
4,336,049	+		Psest_4154	0.11	-1.3
4,336,050	-		Psest_4154	0.11	-0.3
4,336,476	+		Psest_4154	0.65	-0.7
4,336,476	+		Psest_4154	0.65	-2.0
4,336,476	+		Psest_4154	0.65	-0.1
4,336,476	+		Psest_4154	0.65	-0.1
4,336,477	-		Psest_4154	0.65	-0.1
4,336,690	+				-0.0
4,336,690	+				-0.1
4,336,690	+				+0.5
4,336,690	+				-1.3
4,336,691	-				-0.4
4,336,746	-				+0.7
4,336,752	+				-0.2
4,336,752	+				+2.2
4,336,752	+				-0.6
4,336,752	+				-0.3
4,336,753	-				-0.1
4,336,841	-				-0.9
4,336,898	-				-0.5
4,336,908	+				+0.4
4,336,908	+				+0.9
4,336,908	+				+0.5
4,336,908	+				+0.3
4,336,909	-				-0.4
4,336,909	-				-0.7
4,336,951	+				-0.2
4,336,952	-				-2.3
4,336,952	-				+0.9
4,336,952	-				-1.4
4,336,952	-				+0.8
4,336,952	-				-1.2
4,336,952	-				-0.9
4,337,238	+		Psest_4155	0.37	-0.4
4,337,320	+		Psest_4155	0.47	-0.1
4,337,339	+		Psest_4155	0.49	+0.3
4,337,340	-		Psest_4155	0.49	-0.1
4,337,340	-		Psest_4155	0.49	+0.1
4,337,385	+		Psest_4155	0.55	-0.9
4,337,385	+		Psest_4155	0.55	+0.4
4,337,385	+		Psest_4155	0.55	-0.8
4,337,385	+		Psest_4155	0.55	-1.0
4,337,386	-		Psest_4155	0.55	+0.8
4,337,386	-		Psest_4155	0.55	-0.6
4,337,386	-		Psest_4155	0.55	+0.7
4,337,413	-		Psest_4155	0.58	-3.2
4,337,496	+		Psest_4155	0.68	+0.4