Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0531 and Psest_0532 overlap by 41 nucleotides Psest_0532 and Psest_0533 are separated by 97 nucleotides Psest_0533 and Psest_0534 are separated by 117 nucleotides
Psest_0531: Psest_0531 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 584,162 to 585,328
_0531
Psest_0532: Psest_0532 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 585,288 to 586,601
_0532
Psest_0533: Psest_0533 - Sel1 repeat., at 586,699 to 587,235
_0533
Psest_0534: Psest_0534 - hypothetical protein, at 587,353 to 587,976
_0534
Position (kb) 585
586
587 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 584.318 kb on + strand, within Psest_0531 at 584.319 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.676 kb on - strand, within Psest_0531 at 584.676 kb on - strand, within Psest_0531 at 584.693 kb on + strand, within Psest_0531 at 584.694 kb on - strand, within Psest_0531 at 584.717 kb on + strand, within Psest_0531 at 584.717 kb on + strand, within Psest_0531 at 584.718 kb on - strand, within Psest_0531 at 584.740 kb on - strand, within Psest_0531 at 584.740 kb on - strand, within Psest_0531 at 584.806 kb on - strand, within Psest_0531 at 584.806 kb on - strand, within Psest_0531 at 584.806 kb on - strand, within Psest_0531 at 584.917 kb on - strand, within Psest_0531 at 584.917 kb on - strand, within Psest_0531 at 585.156 kb on - strand, within Psest_0531 at 585.156 kb on - strand, within Psest_0531 at 585.156 kb on - strand, within Psest_0531 at 585.177 kb on - strand, within Psest_0531 at 585.214 kb on + strand at 585.760 kb on + strand, within Psest_0532 at 585.760 kb on + strand, within Psest_0532 at 585.760 kb on + strand, within Psest_0532 at 585.760 kb on + strand, within Psest_0532 at 585.760 kb on + strand, within Psest_0532 at 585.761 kb on - strand, within Psest_0532 at 585.761 kb on - strand, within Psest_0532 at 585.761 kb on - strand, within Psest_0532 at 585.819 kb on + strand, within Psest_0532 at 585.820 kb on - strand, within Psest_0532 at 585.835 kb on + strand, within Psest_0532 at 585.835 kb on + strand, within Psest_0532 at 585.835 kb on + strand, within Psest_0532 at 585.835 kb on + strand, within Psest_0532 at 585.835 kb on + strand, within Psest_0532 at 585.836 kb on - strand, within Psest_0532 at 585.836 kb on - strand, within Psest_0532 at 586.100 kb on - strand, within Psest_0532 at 586.100 kb on - strand, within Psest_0532 at 586.123 kb on + strand, within Psest_0532 at 586.123 kb on + strand, within Psest_0532 at 586.124 kb on - strand, within Psest_0532 at 586.124 kb on - strand, within Psest_0532 at 586.124 kb on - strand, within Psest_0532 at 586.124 kb on - strand, within Psest_0532 at 586.460 kb on + strand, within Psest_0532 at 586.461 kb on - strand, within Psest_0532 at 586.641 kb on + strand at 586.641 kb on + strand at 586.641 kb on + strand at 586.641 kb on + strand at 586.641 kb on + strand at 586.642 kb on - strand at 586.642 kb on - strand at 586.642 kb on - strand at 586.642 kb on - strand at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.875 kb on - strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.979 kb on + strand, within Psest_0533 at 586.980 kb on - strand, within Psest_0533 at 587.021 kb on + strand, within Psest_0533 at 587.043 kb on - strand, within Psest_0533 at 587.299 kb on + strand at 587.300 kb on - strand at 587.321 kb on + strand at 587.321 kb on + strand at 587.321 kb on + strand at 587.321 kb on + strand at 587.321 kb on + strand at 587.321 kb on + strand at 587.322 kb on - strand at 587.322 kb on - strand at 587.354 kb on + strand at 587.355 kb on - strand at 587.573 kb on + strand, within Psest_0534 at 587.573 kb on + strand, within Psest_0534 at 587.573 kb on + strand, within Psest_0534 at 587.573 kb on + strand, within Psest_0534 at 587.573 kb on + strand, within Psest_0534 at 587.574 kb on - strand, within Psest_0534
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 584,318 + Psest_0531 0.13 +0.8 584,319 - Psest_0531 0.13 +1.3 584,506 - Psest_0531 0.29 -0.5 584,506 - Psest_0531 0.29 +0.7 584,506 - Psest_0531 0.29 +0.0 584,506 - Psest_0531 0.29 +1.1 584,557 - Psest_0531 0.34 +2.0 584,557 - Psest_0531 0.34 +0.1 584,557 - Psest_0531 0.34 +2.4 584,590 - Psest_0531 0.37 +1.0 584,590 - Psest_0531 0.37 -0.2 584,590 - Psest_0531 0.37 +1.2 584,676 - Psest_0531 0.44 +1.0 584,676 - Psest_0531 0.44 +1.3 584,693 + Psest_0531 0.46 +1.4 584,694 - Psest_0531 0.46 -0.8 584,717 + Psest_0531 0.48 -1.4 584,717 + Psest_0531 0.48 -0.2 584,718 - Psest_0531 0.48 +0.6 584,740 - Psest_0531 0.50 +0.6 584,740 - Psest_0531 0.50 +0.6 584,806 - Psest_0531 0.55 -0.1 584,806 - Psest_0531 0.55 -0.1 584,806 - Psest_0531 0.55 +0.5 584,917 - Psest_0531 0.65 -0.1 584,917 - Psest_0531 0.65 -0.2 585,156 - Psest_0531 0.85 +1.2 585,156 - Psest_0531 0.85 -1.1 585,156 - Psest_0531 0.85 -0.2 585,177 - Psest_0531 0.87 +0.9 585,214 + +0.9 585,760 + Psest_0532 0.36 +1.0 585,760 + Psest_0532 0.36 +2.4 585,760 + Psest_0532 0.36 -0.8 585,760 + Psest_0532 0.36 -0.8 585,760 + Psest_0532 0.36 +0.7 585,761 - Psest_0532 0.36 -1.0 585,761 - Psest_0532 0.36 +3.7 585,761 - Psest_0532 0.36 +0.5 585,819 + Psest_0532 0.40 +0.4 585,820 - Psest_0532 0.40 +1.1 585,835 + Psest_0532 0.42 +2.3 585,835 + Psest_0532 0.42 -0.8 585,835 + Psest_0532 0.42 +0.9 585,835 + Psest_0532 0.42 +4.4 585,835 + Psest_0532 0.42 +1.2 585,836 - Psest_0532 0.42 +1.3 585,836 - Psest_0532 0.42 +1.5 586,100 - Psest_0532 0.62 +2.4 586,100 - Psest_0532 0.62 -0.0 586,123 + Psest_0532 0.64 +0.2 586,123 + Psest_0532 0.64 +0.9 586,124 - Psest_0532 0.64 +0.1 586,124 - Psest_0532 0.64 +2.0 586,124 - Psest_0532 0.64 +0.4 586,124 - Psest_0532 0.64 +1.0 586,460 + Psest_0532 0.89 +1.5 586,461 - Psest_0532 0.89 +4.6 586,641 + +0.3 586,641 + +0.6 586,641 + +0.3 586,641 + +1.2 586,641 + +0.3 586,642 - +0.6 586,642 - +1.6 586,642 - +0.6 586,642 - -0.1 586,875 - Psest_0533 0.33 +1.8 586,875 - Psest_0533 0.33 -0.5 586,875 - Psest_0533 0.33 -2.3 586,875 - Psest_0533 0.33 +1.0 586,875 - Psest_0533 0.33 -1.9 586,875 - Psest_0533 0.33 -2.5 586,875 - Psest_0533 0.33 +1.4 586,875 - Psest_0533 0.33 -2.9 586,875 - Psest_0533 0.33 -1.0 586,875 - Psest_0533 0.33 -1.2 586,875 - Psest_0533 0.33 +1.4 586,875 - Psest_0533 0.33 -1.2 586,979 + Psest_0533 0.52 -1.2 586,979 + Psest_0533 0.52 -0.2 586,979 + Psest_0533 0.52 -1.5 586,979 + Psest_0533 0.52 -0.0 586,979 + Psest_0533 0.52 +0.8 586,979 + Psest_0533 0.52 -2.5 586,979 + Psest_0533 0.52 -1.2 586,980 - Psest_0533 0.52 -0.1 587,021 + Psest_0533 0.60 -3.1 587,043 - Psest_0533 0.64 -1.8 587,299 + -2.3 587,300 - -1.5 587,321 + -1.8 587,321 + +3.1 587,321 + +0.8 587,321 + +0.2 587,321 + -1.0 587,321 + -1.2 587,322 - -0.9 587,322 - +0.6 587,354 + -1.9 587,355 - -1.0 587,573 + Psest_0534 0.35 -0.6 587,573 + Psest_0534 0.35 -0.9 587,573 + Psest_0534 0.35 -0.8 587,573 + Psest_0534 0.35 +2.0 587,573 + Psest_0534 0.35 -0.5 587,574 - Psest_0534 0.35 +1.1
Or see this region's nucleotide sequence