Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4280 and Psest_4281 overlap by 4 nucleotides Psest_4281 and Psest_4282 overlap by 4 nucleotides
Psest_4280: Psest_4280 - ABC-type spermidine/putrescine transport system, permease component II, at 4,471,324 to 4,472,226
_4280
Psest_4281: Psest_4281 - ABC-type spermidine/putrescine transport system, permease component I, at 4,472,223 to 4,473,119
_4281
Psest_4282: Psest_4282 - spermidine/putrescine ABC transporter ATP-binding subunit, at 4,473,116 to 4,474,267
_4282
Position (kb) 4472
4473
4474 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 4471.237 kb on - strand at 4471.237 kb on - strand at 4471.265 kb on + strand at 4471.266 kb on - strand at 4471.266 kb on - strand at 4471.329 kb on + strand at 4471.329 kb on + strand at 4471.329 kb on + strand at 4471.330 kb on - strand at 4471.330 kb on - strand at 4471.330 kb on - strand at 4471.330 kb on - strand at 4471.330 kb on - strand at 4471.781 kb on + strand, within Psest_4280 at 4471.909 kb on + strand, within Psest_4280 at 4471.910 kb on - strand, within Psest_4280 at 4472.021 kb on + strand, within Psest_4280 at 4472.022 kb on - strand, within Psest_4280 at 4472.022 kb on - strand, within Psest_4280 at 4472.087 kb on + strand, within Psest_4280 at 4472.144 kb on + strand at 4472.144 kb on + strand at 4472.144 kb on + strand at 4472.144 kb on + strand at 4472.145 kb on - strand at 4472.145 kb on - strand at 4472.145 kb on - strand at 4472.145 kb on - strand at 4472.145 kb on - strand at 4472.171 kb on + strand at 4472.172 kb on - strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.226 kb on + strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.227 kb on - strand at 4472.567 kb on - strand, within Psest_4281 at 4472.593 kb on + strand, within Psest_4281 at 4472.593 kb on + strand, within Psest_4281 at 4472.594 kb on - strand, within Psest_4281 at 4472.594 kb on - strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.599 kb on + strand, within Psest_4281 at 4472.600 kb on - strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.614 kb on + strand, within Psest_4281 at 4472.615 kb on - strand, within Psest_4281 at 4472.615 kb on - strand, within Psest_4281 at 4472.682 kb on - strand, within Psest_4281 at 4472.723 kb on - strand, within Psest_4281 at 4472.813 kb on - strand, within Psest_4281 at 4472.813 kb on - strand, within Psest_4281 at 4472.881 kb on + strand, within Psest_4281 at 4472.882 kb on - strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.893 kb on + strand, within Psest_4281 at 4472.894 kb on - strand, within Psest_4281 at 4472.894 kb on - strand, within Psest_4281 at 4472.894 kb on - strand, within Psest_4281 at 4472.894 kb on - strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.920 kb on + strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.921 kb on - strand, within Psest_4281 at 4472.940 kb on + strand, within Psest_4281 at 4472.941 kb on - strand, within Psest_4281 at 4472.962 kb on + strand, within Psest_4281 at 4472.962 kb on + strand, within Psest_4281 at 4472.962 kb on + strand, within Psest_4281 at 4472.963 kb on - strand, within Psest_4281 at 4472.978 kb on + strand, within Psest_4281 at 4472.978 kb on + strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.979 kb on - strand, within Psest_4281 at 4472.980 kb on + strand, within Psest_4281 at 4472.981 kb on - strand, within Psest_4281 at 4472.981 kb on - strand, within Psest_4281 at 4472.981 kb on - strand, within Psest_4281 at 4473.098 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.159 kb on + strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.160 kb on - strand at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.249 kb on + strand, within Psest_4282 at 4473.250 kb on - strand, within Psest_4282 at 4473.250 kb on - strand, within Psest_4282 at 4473.250 kb on - strand, within Psest_4282 at 4473.250 kb on - strand, within Psest_4282 at 4473.250 kb on - strand, within Psest_4282 at 4473.252 kb on + strand, within Psest_4282 at 4473.253 kb on - strand, within Psest_4282 at 4473.253 kb on - strand, within Psest_4282 at 4473.273 kb on + strand, within Psest_4282 at 4473.274 kb on - strand, within Psest_4282 at 4473.309 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.420 kb on + strand, within Psest_4282 at 4473.421 kb on - strand, within Psest_4282 at 4473.421 kb on - strand, within Psest_4282 at 4473.421 kb on - strand, within Psest_4282 at 4473.546 kb on + strand, within Psest_4282 at 4473.546 kb on + strand, within Psest_4282 at 4473.546 kb on + strand, within Psest_4282 at 4473.547 kb on - strand, within Psest_4282 at 4473.547 kb on - strand, within Psest_4282 at 4473.547 kb on - strand, within Psest_4282 at 4473.547 kb on - strand, within Psest_4282 at 4473.547 kb on - strand, within Psest_4282 at 4473.960 kb on + strand, within Psest_4282 at 4473.994 kb on - strand, within Psest_4282 at 4474.069 kb on + strand, within Psest_4282 at 4474.070 kb on - strand, within Psest_4282 at 4474.070 kb on - strand, within Psest_4282
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 4,471,237 - -1.8 4,471,237 - +0.4 4,471,265 + -0.7 4,471,266 - +0.7 4,471,266 - +1.8 4,471,329 + +0.4 4,471,329 + +0.7 4,471,329 + +0.7 4,471,330 - -1.0 4,471,330 - +0.0 4,471,330 - +0.5 4,471,330 - -0.1 4,471,330 - -2.1 4,471,781 + Psest_4280 0.51 +0.7 4,471,909 + Psest_4280 0.65 -1.4 4,471,910 - Psest_4280 0.65 -0.8 4,472,021 + Psest_4280 0.77 -1.5 4,472,022 - Psest_4280 0.77 -1.8 4,472,022 - Psest_4280 0.77 +1.5 4,472,087 + Psest_4280 0.84 +3.0 4,472,144 + +0.1 4,472,144 + +1.7 4,472,144 + -0.2 4,472,144 + +1.0 4,472,145 - +0.6 4,472,145 - +1.1 4,472,145 - -1.8 4,472,145 - +1.7 4,472,145 - +3.0 4,472,171 + -0.9 4,472,172 - -2.7 4,472,226 + +2.0 4,472,226 + +3.8 4,472,226 + -0.4 4,472,226 + +0.9 4,472,226 + +2.8 4,472,226 + -0.3 4,472,226 + +2.5 4,472,227 - -0.0 4,472,227 - +1.9 4,472,227 - +0.8 4,472,227 - +1.5 4,472,227 - +0.2 4,472,227 - -0.4 4,472,227 - +0.6 4,472,227 - -1.7 4,472,567 - Psest_4281 0.38 +1.4 4,472,593 + Psest_4281 0.41 +1.0 4,472,593 + Psest_4281 0.41 -0.0 4,472,594 - Psest_4281 0.41 -2.7 4,472,594 - Psest_4281 0.41 +2.9 4,472,599 + Psest_4281 0.42 +1.4 4,472,599 + Psest_4281 0.42 +0.2 4,472,599 + Psest_4281 0.42 -0.8 4,472,599 + Psest_4281 0.42 +0.4 4,472,599 + Psest_4281 0.42 +1.7 4,472,599 + Psest_4281 0.42 -0.8 4,472,599 + Psest_4281 0.42 +0.4 4,472,600 - Psest_4281 0.42 +1.7 4,472,614 + Psest_4281 0.44 +0.1 4,472,614 + Psest_4281 0.44 +0.8 4,472,614 + Psest_4281 0.44 -0.8 4,472,614 + Psest_4281 0.44 -2.7 4,472,614 + Psest_4281 0.44 -0.5 4,472,614 + Psest_4281 0.44 -0.9 4,472,614 + Psest_4281 0.44 +0.8 4,472,614 + Psest_4281 0.44 -1.5 4,472,614 + Psest_4281 0.44 -2.0 4,472,614 + Psest_4281 0.44 -2.4 4,472,615 - Psest_4281 0.44 +1.3 4,472,615 - Psest_4281 0.44 -0.3 4,472,682 - Psest_4281 0.51 -0.4 4,472,723 - Psest_4281 0.56 -0.2 4,472,813 - Psest_4281 0.66 +1.0 4,472,813 - Psest_4281 0.66 -1.7 4,472,881 + Psest_4281 0.73 +1.1 4,472,882 - Psest_4281 0.73 +2.6 4,472,893 + Psest_4281 0.75 +1.0 4,472,893 + Psest_4281 0.75 +1.8 4,472,893 + Psest_4281 0.75 +1.1 4,472,893 + Psest_4281 0.75 +2.3 4,472,893 + Psest_4281 0.75 +0.5 4,472,893 + Psest_4281 0.75 +1.4 4,472,894 - Psest_4281 0.75 +0.7 4,472,894 - Psest_4281 0.75 +1.1 4,472,894 - Psest_4281 0.75 -1.0 4,472,894 - Psest_4281 0.75 +0.5 4,472,920 + Psest_4281 0.78 -0.9 4,472,920 + Psest_4281 0.78 +0.3 4,472,920 + Psest_4281 0.78 -1.2 4,472,920 + Psest_4281 0.78 +2.5 4,472,920 + Psest_4281 0.78 -0.7 4,472,920 + Psest_4281 0.78 +0.8 4,472,920 + Psest_4281 0.78 +0.8 4,472,920 + Psest_4281 0.78 +2.3 4,472,920 + Psest_4281 0.78 +3.1 4,472,920 + Psest_4281 0.78 +3.5 4,472,920 + Psest_4281 0.78 +0.1 4,472,920 + Psest_4281 0.78 +0.6 4,472,920 + Psest_4281 0.78 +1.8 4,472,920 + Psest_4281 0.78 +1.8 4,472,920 + Psest_4281 0.78 +0.3 4,472,921 - Psest_4281 0.78 -2.1 4,472,921 - Psest_4281 0.78 +1.4 4,472,921 - Psest_4281 0.78 +1.3 4,472,921 - Psest_4281 0.78 -2.5 4,472,921 - Psest_4281 0.78 +0.3 4,472,921 - Psest_4281 0.78 +1.7 4,472,921 - Psest_4281 0.78 +0.1 4,472,921 - Psest_4281 0.78 -2.5 4,472,921 - Psest_4281 0.78 -2.1 4,472,921 - Psest_4281 0.78 -1.0 4,472,921 - Psest_4281 0.78 -3.6 4,472,940 + Psest_4281 0.80 +0.1 4,472,941 - Psest_4281 0.80 -2.8 4,472,962 + Psest_4281 0.82 +2.0 4,472,962 + Psest_4281 0.82 +1.8 4,472,962 + Psest_4281 0.82 +0.1 4,472,963 - Psest_4281 0.82 +0.4 4,472,978 + Psest_4281 0.84 +2.0 4,472,978 + Psest_4281 0.84 +5.4 4,472,979 - Psest_4281 0.84 +1.8 4,472,979 - Psest_4281 0.84 -1.1 4,472,979 - Psest_4281 0.84 +2.7 4,472,979 - Psest_4281 0.84 +0.8 4,472,979 - Psest_4281 0.84 -0.0 4,472,979 - Psest_4281 0.84 +1.8 4,472,980 + Psest_4281 0.84 +2.5 4,472,981 - Psest_4281 0.85 -2.7 4,472,981 - Psest_4281 0.85 +1.6 4,472,981 - Psest_4281 0.85 +0.5 4,473,098 + -0.0 4,473,159 + +0.6 4,473,159 + -1.9 4,473,159 + -2.2 4,473,159 + -0.8 4,473,159 + -0.7 4,473,159 + +2.5 4,473,159 + +0.8 4,473,159 + +0.2 4,473,159 + +2.4 4,473,159 + -2.0 4,473,159 + -1.0 4,473,159 + -0.5 4,473,159 + -1.8 4,473,159 + -1.8 4,473,159 + +0.7 4,473,159 + -0.0 4,473,160 - -0.4 4,473,160 - +0.4 4,473,160 - +6.2 4,473,160 - -0.1 4,473,160 - +1.5 4,473,160 - -3.7 4,473,160 - +2.9 4,473,160 - +0.2 4,473,160 - -0.8 4,473,160 - +0.2 4,473,160 - +3.3 4,473,160 - -1.0 4,473,160 - -1.0 4,473,160 - +0.3 4,473,249 + Psest_4282 0.12 +0.3 4,473,249 + Psest_4282 0.12 +2.4 4,473,249 + Psest_4282 0.12 +0.1 4,473,249 + Psest_4282 0.12 -0.2 4,473,249 + Psest_4282 0.12 +0.4 4,473,249 + Psest_4282 0.12 +1.1 4,473,249 + Psest_4282 0.12 +0.7 4,473,249 + Psest_4282 0.12 +0.2 4,473,249 + Psest_4282 0.12 +2.0 4,473,249 + Psest_4282 0.12 +1.2 4,473,249 + Psest_4282 0.12 +0.1 4,473,249 + Psest_4282 0.12 +0.1 4,473,249 + Psest_4282 0.12 +0.6 4,473,250 - Psest_4282 0.12 -0.5 4,473,250 - Psest_4282 0.12 -0.2 4,473,250 - Psest_4282 0.12 -0.5 4,473,250 - Psest_4282 0.12 -0.3 4,473,250 - Psest_4282 0.12 -1.5 4,473,252 + Psest_4282 0.12 -0.8 4,473,253 - Psest_4282 0.12 +1.7 4,473,253 - Psest_4282 0.12 +1.2 4,473,273 + Psest_4282 0.14 +0.4 4,473,274 - Psest_4282 0.14 +1.4 4,473,309 + Psest_4282 0.17 +1.2 4,473,420 + Psest_4282 0.26 +1.1 4,473,420 + Psest_4282 0.26 +1.3 4,473,420 + Psest_4282 0.26 +2.9 4,473,420 + Psest_4282 0.26 +0.9 4,473,420 + Psest_4282 0.26 -2.2 4,473,420 + Psest_4282 0.26 +1.2 4,473,420 + Psest_4282 0.26 +0.4 4,473,420 + Psest_4282 0.26 +0.6 4,473,420 + Psest_4282 0.26 +3.1 4,473,420 + Psest_4282 0.26 +1.5 4,473,421 - Psest_4282 0.26 +0.5 4,473,421 - Psest_4282 0.26 -0.2 4,473,421 - Psest_4282 0.26 +1.1 4,473,546 + Psest_4282 0.37 +0.8 4,473,546 + Psest_4282 0.37 +0.5 4,473,546 + Psest_4282 0.37 +0.6 4,473,547 - Psest_4282 0.37 -0.6 4,473,547 - Psest_4282 0.37 -2.5 4,473,547 - Psest_4282 0.37 +0.4 4,473,547 - Psest_4282 0.37 +0.6 4,473,547 - Psest_4282 0.37 +1.2 4,473,960 + Psest_4282 0.73 +0.5 4,473,994 - Psest_4282 0.76 +0.7 4,474,069 + Psest_4282 0.83 -0.6 4,474,070 - Psest_4282 0.83 -0.3 4,474,070 - Psest_4282 0.83 -0.8
Or see this region's nucleotide sequence