Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3348

Experiment: Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.015 mg/ml
3,515,666	+		Psest_3347	0.66	-1.2
3,515,666	+		Psest_3347	0.66	-0.1
3,515,667	-		Psest_3347	0.66	+0.0
3,515,667	-		Psest_3347	0.66	-0.3
3,515,669	+		Psest_3347	0.66	-1.9
3,515,670	-		Psest_3347	0.66	+0.8
3,515,670	-		Psest_3347	0.66	+0.4
3,515,670	-		Psest_3347	0.66	-0.9
3,515,948	+		Psest_3347	0.78	-0.9
3,515,949	-		Psest_3347	0.78	-2.6
3,516,117	+		Psest_3347	0.86	+0.0
3,516,117	+		Psest_3347	0.86	+3.5
3,516,118	-		Psest_3347	0.86	+0.8
3,516,118	-		Psest_3347	0.86	-2.6
3,516,175	+		Psest_3347	0.88	+1.7
3,516,175	+		Psest_3347	0.88	-4.1
3,516,175	+		Psest_3347	0.88	-0.3
3,516,176	-		Psest_3347	0.88	-0.7
3,516,231	-				+0.9
3,516,231	-				+0.8
3,516,250	-				-0.7
3,516,260	+				+1.0
3,516,260	+				+0.2
3,516,260	+				+0.3
3,516,260	+				+1.1
3,516,260	+				+1.9
3,516,260	+				-2.3
3,516,260	+				-0.8
3,516,260	+				+0.9
3,516,261	-				+1.0
3,516,261	-				+0.8
3,516,261	-				+1.1
3,516,261	-				-1.9
3,516,261	-				-0.4
3,516,261	-				-0.6
3,516,261	-				+0.2
3,516,425	-				+0.3
3,516,443	+				-1.3
3,516,443	+				+1.3
3,516,443	+				+4.1
3,516,443	+				+0.3
3,516,443	+				+0.1
3,516,443	+				-1.5
3,516,443	+				-0.3
3,516,443	+				+1.5
3,516,443	+				-0.4
3,516,443	+				+2.4
3,516,443	+				-0.6
3,516,444	-				-1.1
3,516,444	-				-1.5
3,516,444	-				-0.6
3,516,444	-				+2.2
3,516,444	-				+1.9
3,516,444	-				-0.3
3,516,444	-				-2.5
3,516,444	-				+2.4
3,516,444	-				+0.4
3,516,444	-				+1.6
3,516,444	-				-1.6
3,516,444	-				-0.4
3,516,444	-				+0.6
3,516,444	-				+1.8
3,516,444	-				+0.3
3,516,486	-				-1.9
3,516,588	+				-0.9
3,516,588	+				-1.1
3,516,588	+				-0.5
3,516,589	-				+0.9
3,516,589	-				-1.5
3,516,589	-				-1.8
3,516,747	+		Psest_3348	0.24	+3.2
3,516,747	+		Psest_3348	0.24	-1.8
3,516,840	-		Psest_3348	0.38	-2.5
3,516,840	-		Psest_3348	0.38	-1.8
3,516,863	+		Psest_3348	0.41	-2.4
3,516,960	-		Psest_3348	0.56	-2.5
3,516,960	-		Psest_3348	0.56	-1.7
3,516,992	+		Psest_3348	0.60	+2.9
3,516,992	+		Psest_3348	0.60	+1.0
3,516,992	+		Psest_3348	0.60	+4.6
3,516,992	+		Psest_3348	0.60	+0.1
3,516,992	+		Psest_3348	0.60	+0.4
3,516,992	+		Psest_3348	0.60	+0.1
3,516,992	+		Psest_3348	0.60	-0.6
3,516,992	+		Psest_3348	0.60	-1.3
3,516,993	-		Psest_3348	0.60	+1.4
3,516,993	-		Psest_3348	0.60	+1.7
3,516,993	-		Psest_3348	0.60	-2.1
3,516,993	-		Psest_3348	0.60	+0.7
3,516,993	-		Psest_3348	0.60	+2.8
3,517,226	+				-0.5
3,517,226	+				-1.4
3,517,226	+				-0.3
3,517,227	-				+1.8
3,517,227	-				+1.0
3,517,227	-				+0.1
3,517,547	+		Psest_3349	0.38	+0.7
3,517,547	+		Psest_3349	0.38	-2.6
3,517,548	-		Psest_3349	0.38	-0.7
3,517,548	-		Psest_3349	0.38	+2.3
3,517,548	-		Psest_3349	0.38	+1.9
3,517,603	+		Psest_3349	0.46	-1.7
3,517,603	+		Psest_3349	0.46	-2.1
3,517,603	+		Psest_3349	0.46	-2.6
3,517,603	+		Psest_3349	0.46	-1.1
3,517,603	+		Psest_3349	0.46	-0.6
3,517,603	+		Psest_3349	0.46	-1.1
3,517,603	+		Psest_3349	0.46	-1.2
3,517,603	+		Psest_3349	0.46	-1.3
3,517,603	+		Psest_3349	0.46	+2.3
3,517,603	+		Psest_3349	0.46	+0.8
3,517,603	+		Psest_3349	0.46	-2.1
3,517,603	+		Psest_3349	0.46	+2.2
3,517,603	+		Psest_3349	0.46	-0.7
3,517,603	+		Psest_3349	0.46	+0.6
3,517,603	+		Psest_3349	0.46	-0.3
3,517,603	+		Psest_3349	0.46	+1.4
3,517,604	-		Psest_3349	0.46	+0.8
3,517,604	-		Psest_3349	0.46	-1.9
3,517,604	-		Psest_3349	0.46	-0.7
3,517,604	-		Psest_3349	0.46	-1.5
3,517,604	-		Psest_3349	0.46	+3.2
3,517,604	-		Psest_3349	0.46	-0.6
3,517,604	-		Psest_3349	0.46	-2.0
3,517,760	+		Psest_3349	0.67	+3.2
3,517,760	+		Psest_3349	0.67	+3.2
3,517,761	-		Psest_3349	0.67	+0.7
3,517,780	+		Psest_3349	0.69	+0.0
3,517,780	+		Psest_3349	0.69	+1.0
3,518,061	-				+0.1
3,518,067	+				+1.1
3,518,068	-				-2.7
3,518,068	-				-1.8
3,518,073	+				+2.2
3,518,073	+				+0.6
3,518,073	+				+0.7
3,518,073	+				+0.3
3,518,074	-				+1.0
3,518,074	-				+1.8
3,518,074	-				-0.2
3,518,074	-				-1.0
3,518,074	-				-2.6
3,518,074	-				+2.8
3,518,074	-				+1.7
3,518,074	-				+0.9
3,518,074	-				+2.2
3,518,074	-				+1.1
3,518,074	-				+1.7
3,518,074	-				+1.0
3,518,074	-				-0.4
3,518,074	-				+1.0
3,518,074	-				+1.4
3,518,074	-				-2.4
3,518,076	+				-2.1
3,518,076	+				-0.3
3,518,077	-				-1.7
3,518,077	-				-0.2
3,518,118	+				+0.1
3,518,118	+				+1.1
3,518,119	-				+1.0
3,518,130	+				+0.5
3,518,131	-				+0.1
3,518,190	+		Psest_3350	0.11	+0.2
3,518,191	-		Psest_3350	0.11	+1.3
3,518,191	-		Psest_3350	0.11	+0.9
3,518,196	+		Psest_3350	0.11	+2.6
3,518,196	+		Psest_3350	0.11	-0.9
3,518,196	+		Psest_3350	0.11	-0.2
3,518,196	+		Psest_3350	0.11	+0.1
3,518,196	+		Psest_3350	0.11	+3.8
3,518,196	+		Psest_3350	0.11	+0.3
3,518,196	+		Psest_3350	0.11	+0.6
3,518,196	+		Psest_3350	0.11	-0.1
3,518,197	-		Psest_3350	0.11	-2.2
3,518,197	-		Psest_3350	0.11	+0.4
3,518,197	-		Psest_3350	0.11	-0.1
3,518,197	-		Psest_3350	0.11	+0.5
3,518,197	-		Psest_3350	0.11	+1.7
3,518,197	-		Psest_3350	0.11	+1.0
3,518,197	-		Psest_3350	0.11	+0.4
3,518,205	+		Psest_3350	0.12	+2.6
3,518,206	-		Psest_3350	0.12	-0.3
3,518,206	-		Psest_3350	0.12	-2.1
3,518,206	-		Psest_3350	0.12	-0.8
3,518,206	-		Psest_3350	0.12	+1.0
3,518,206	-		Psest_3350	0.12	+0.2
3,518,206	-		Psest_3350	0.12	+1.7