Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2664 and Psest_2665 are separated by 54 nucleotides Psest_2665 and Psest_2666 are separated by 20 nucleotides
Psest_2664: Psest_2664 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 2,851,496 to 2,852,485
_2664
Psest_2665: Psest_2665 - Citrate lyase beta subunit, at 2,852,540 to 2,853,367
_2665
Psest_2666: Psest_2666 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,853,388 to 2,854,593
_2666
Position (kb)
2852
2853
2854 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand, within Psest_2664 at 2851.782 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.815 kb on + strand, within Psest_2664 at 2851.816 kb on - strand, within Psest_2664 at 2851.848 kb on + strand, within Psest_2664 at 2851.848 kb on + strand, within Psest_2664 at 2851.848 kb on + strand, within Psest_2664 at 2851.902 kb on + strand, within Psest_2664 at 2852.175 kb on + strand, within Psest_2664 at 2852.175 kb on + strand, within Psest_2664 at 2852.175 kb on + strand, within Psest_2664 at 2852.175 kb on + strand, within Psest_2664 at 2852.176 kb on - strand, within Psest_2664 at 2852.196 kb on + strand, within Psest_2664 at 2852.476 kb on + strand at 2852.476 kb on + strand at 2852.491 kb on + strand at 2852.515 kb on + strand at 2853.703 kb on - strand, within Psest_2666 at 2853.873 kb on - strand, within Psest_2666 at 2853.878 kb on + strand, within Psest_2666 at 2853.878 kb on + strand, within Psest_2666 at 2853.879 kb on - strand, within Psest_2666 at 2853.879 kb on - strand, within Psest_2666 at 2853.929 kb on + strand, within Psest_2666 at 2853.930 kb on - strand, within Psest_2666 at 2853.935 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.938 kb on + strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.939 kb on - strand, within Psest_2666 at 2853.947 kb on + strand, within Psest_2666 at 2854.047 kb on - strand, within Psest_2666 at 2854.047 kb on - strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.052 kb on + strand, within Psest_2666 at 2854.053 kb on - strand, within Psest_2666 at 2854.053 kb on - strand, within Psest_2666 at 2854.164 kb on - strand, within Psest_2666 at 2854.182 kb on - strand, within Psest_2666
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 2,851,782 + Psest_2664 0.29 -0.3 2,851,782 + Psest_2664 0.29 +0.2 2,851,782 + +1.1 2,851,782 + Psest_2664 0.29 +1.4 2,851,782 + Psest_2664 0.29 +0.9 2,851,782 + Psest_2664 0.29 -1.0 2,851,782 + Psest_2664 0.29 +0.6 2,851,782 + Psest_2664 0.29 -0.1 2,851,815 + Psest_2664 0.32 -0.8 2,851,815 + Psest_2664 0.32 -0.4 2,851,815 + Psest_2664 0.32 +0.7 2,851,815 + Psest_2664 0.32 +0.6 2,851,815 + Psest_2664 0.32 -1.1 2,851,815 + Psest_2664 0.32 +1.1 2,851,816 - Psest_2664 0.32 -0.4 2,851,848 + Psest_2664 0.36 +0.1 2,851,848 + Psest_2664 0.36 -1.1 2,851,848 + Psest_2664 0.36 +2.8 2,851,902 + Psest_2664 0.41 -0.1 2,852,175 + Psest_2664 0.69 +0.1 2,852,175 + Psest_2664 0.69 +1.3 2,852,175 + Psest_2664 0.69 -1.8 2,852,175 + Psest_2664 0.69 -0.5 2,852,176 - Psest_2664 0.69 -0.0 2,852,196 + Psest_2664 0.71 -1.9 2,852,476 + -0.1 2,852,476 + -1.5 2,852,491 + -1.4 2,852,515 + -1.9 2,853,703 - Psest_2666 0.26 -1.1 2,853,873 - Psest_2666 0.40 -1.2 2,853,878 + Psest_2666 0.41 +1.0 2,853,878 + Psest_2666 0.41 +0.1 2,853,879 - Psest_2666 0.41 +0.1 2,853,879 - Psest_2666 0.41 +0.1 2,853,929 + Psest_2666 0.45 -0.5 2,853,930 - Psest_2666 0.45 -3.0 2,853,935 + Psest_2666 0.45 +2.6 2,853,938 + Psest_2666 0.46 -3.1 2,853,938 + Psest_2666 0.46 -0.6 2,853,938 + Psest_2666 0.46 +1.1 2,853,939 - Psest_2666 0.46 +0.5 2,853,939 - Psest_2666 0.46 -2.1 2,853,939 - Psest_2666 0.46 +0.1 2,853,947 + Psest_2666 0.46 -0.3 2,854,047 - Psest_2666 0.55 +1.2 2,854,047 - Psest_2666 0.55 -3.8 2,854,052 + Psest_2666 0.55 +1.0 2,854,052 + Psest_2666 0.55 +0.8 2,854,052 + Psest_2666 0.55 -2.4 2,854,052 + Psest_2666 0.55 +0.2 2,854,052 + Psest_2666 0.55 +0.9 2,854,052 + Psest_2666 0.55 +0.6 2,854,052 + Psest_2666 0.55 -0.9 2,854,052 + Psest_2666 0.55 +0.6 2,854,052 + Psest_2666 0.55 +0.3 2,854,052 + Psest_2666 0.55 -3.6 2,854,052 + Psest_2666 0.55 -1.1 2,854,052 + Psest_2666 0.55 -0.3 2,854,053 - Psest_2666 0.55 -0.9 2,854,053 - Psest_2666 0.55 +0.9 2,854,164 - Psest_2666 0.64 +0.9 2,854,182 - Psest_2666 0.66 -0.3
Or see this region's nucleotide sequence