Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2494

Experiment: Paraquat dichloride 0.015 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2493 and Psest_2494 are separated by 69 nucleotidesPsest_2494 and Psest_2495 are separated by 292 nucleotides Psest_2493: Psest_2493 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component), at 2,666,987 to 2,668,207 _2493 Psest_2494: Psest_2494 - 2-oxoglutarate dehydrogenase, E1 component, at 2,668,277 to 2,671,108 _2494 Psest_2495: Psest_2495 - succinate dehydrogenase and fumarate reductase iron-sulfur protein, at 2,671,401 to 2,672,105 _2495 Position (kb) 2668 2669 2670 2671 2672Strain fitness (log2 ratio) -1 0 1at 2668.237 kb on - strandat 2671.347 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml
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2,668,237 - -0.4
2,671,347 - +0.4

Or see this region's nucleotide sequence