Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2491 and Psest_2492 are separated by 194 nucleotides Psest_2492 and Psest_2493 are separated by 95 nucleotides
Psest_2491: Psest_2491 - succinyl-CoA synthetase, beta subunit, at 2,664,094 to 2,665,260
_2491
Psest_2492: Psest_2492 - dihydrolipoamide dehydrogenase, at 2,665,455 to 2,666,891
_2492
Psest_2493: Psest_2493 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component), at 2,666,987 to 2,668,207
_2493
Position (kb)
2665
2666
2667 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2664.506 kb on + strand, within Psest_2491 at 2664.506 kb on + strand, within Psest_2491 at 2664.506 kb on + strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.591 kb on - strand, within Psest_2491 at 2664.689 kb on + strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.935 kb on + strand, within Psest_2491 at 2665.082 kb on - strand, within Psest_2491 at 2665.200 kb on + strand at 2665.236 kb on + strand at 2665.267 kb on + strand at 2665.295 kb on - strand at 2665.358 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 2,664,506 + Psest_2491 0.35 -1.8 2,664,506 + Psest_2491 0.35 +2.2 2,664,506 + Psest_2491 0.35 +2.5 2,664,507 - Psest_2491 0.35 +3.1 2,664,507 - Psest_2491 0.35 +1.1 2,664,507 - Psest_2491 0.35 +0.6 2,664,507 - Psest_2491 0.35 +0.5 2,664,507 - Psest_2491 0.35 -0.7 2,664,591 - Psest_2491 0.43 +1.1 2,664,689 + Psest_2491 0.51 +0.8 2,664,690 - Psest_2491 0.51 -0.3 2,664,690 - Psest_2491 0.51 +0.7 2,664,690 - Psest_2491 0.51 +1.5 2,664,690 - Psest_2491 0.51 -1.2 2,664,935 + Psest_2491 0.72 -2.1 2,665,082 - Psest_2491 0.85 +2.3 2,665,200 + -0.7 2,665,236 + +0.3 2,665,267 + +0.0 2,665,295 - +2.0 2,665,358 - +0.1
Or see this region's nucleotide sequence