Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2362 and Psest_2363 overlap by 4 nucleotides Psest_2363 and Psest_2364 overlap by 4 nucleotides Psest_2364 and Psest_2365 are separated by 2 nucleotides Psest_2365 and Psest_2366 are separated by 3 nucleotides
Psest_2362: Psest_2362 - Zn-dependent hydrolases, including glyoxylases, at 2,516,338 to 2,517,120
_2362
Psest_2363: Psest_2363 - hypothetical protein, at 2,517,117 to 2,517,926
_2363
Psest_2364: Psest_2364 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 2,517,923 to 2,518,801
_2364
Psest_2365: Psest_2365 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 2,518,804 to 2,519,643
_2365
Psest_2366: Psest_2366 - Homoserine acetyltransferase, at 2,519,647 to 2,520,669
_2366
Position (kb)
2517
2518
2519 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2517.109 kb on + strand at 2517.139 kb on - strand at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.208 kb on - strand, within Psest_2363 at 2517.362 kb on + strand, within Psest_2363 at 2517.362 kb on + strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.363 kb on - strand, within Psest_2363 at 2517.477 kb on + strand, within Psest_2363 at 2517.478 kb on - strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.588 kb on + strand, within Psest_2363 at 2517.589 kb on - strand, within Psest_2363 at 2517.656 kb on - strand, within Psest_2363 at 2517.656 kb on - strand, within Psest_2363 at 2517.796 kb on - strand, within Psest_2363 at 2517.905 kb on + strand at 2518.289 kb on + strand, within Psest_2364 at 2518.289 kb on + strand, within Psest_2364 at 2518.290 kb on - strand, within Psest_2364 at 2518.290 kb on - strand, within Psest_2364 at 2518.349 kb on + strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.350 kb on - strand, within Psest_2364 at 2518.616 kb on + strand, within Psest_2364 at 2518.617 kb on - strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.685 kb on + strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364 at 2518.686 kb on - strand, within Psest_2364 at 2519.431 kb on + strand, within Psest_2365 at 2519.432 kb on - strand, within Psest_2365 at 2519.432 kb on - strand, within Psest_2365 at 2519.432 kb on - strand, within Psest_2365 at 2519.432 kb on - strand, within Psest_2365 at 2519.432 kb on - strand, within Psest_2365 at 2519.660 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 2,517,109 + +1.8 2,517,139 - -2.4 2,517,208 - Psest_2363 0.11 +0.5 2,517,208 - Psest_2363 0.11 +1.1 2,517,208 - Psest_2363 0.11 +0.8 2,517,208 - Psest_2363 0.11 -0.4 2,517,362 + Psest_2363 0.30 +1.6 2,517,362 + Psest_2363 0.30 +0.7 2,517,363 - Psest_2363 0.30 -0.5 2,517,363 - Psest_2363 0.30 +2.9 2,517,363 - Psest_2363 0.30 +0.2 2,517,477 + Psest_2363 0.44 +0.4 2,517,478 - Psest_2363 0.45 -0.5 2,517,588 + Psest_2363 0.58 -0.1 2,517,588 + Psest_2363 0.58 +1.6 2,517,588 + Psest_2363 0.58 +0.9 2,517,589 - Psest_2363 0.58 -0.0 2,517,656 - Psest_2363 0.67 +0.0 2,517,656 - Psest_2363 0.67 -0.3 2,517,796 - Psest_2363 0.84 +0.0 2,517,905 + -0.6 2,518,289 + Psest_2364 0.42 -1.3 2,518,289 + Psest_2364 0.42 -1.1 2,518,290 - Psest_2364 0.42 -1.0 2,518,290 - Psest_2364 0.42 -0.5 2,518,349 + Psest_2364 0.48 -1.0 2,518,350 - Psest_2364 0.49 -2.8 2,518,350 - Psest_2364 0.49 -0.7 2,518,350 - Psest_2364 0.49 -0.6 2,518,616 + Psest_2364 0.79 +0.8 2,518,617 - Psest_2364 0.79 -3.2 2,518,685 + Psest_2364 0.87 -1.4 2,518,685 + Psest_2364 0.87 +1.6 2,518,685 + Psest_2364 0.87 +1.3 2,518,685 + Psest_2364 0.87 +1.3 2,518,685 + Psest_2364 0.87 +0.0 2,518,685 + Psest_2364 0.87 -0.1 2,518,686 - Psest_2364 0.87 -0.1 2,518,686 - Psest_2364 0.87 -0.0 2,518,686 - Psest_2364 0.87 -0.8 2,519,431 + Psest_2365 0.75 -0.6 2,519,432 - Psest_2365 0.75 -0.3 2,519,432 - Psest_2365 0.75 +1.0 2,519,432 - Psest_2365 0.75 +0.1 2,519,432 - Psest_2365 0.75 +0.2 2,519,432 - Psest_2365 0.75 +1.1 2,519,660 - +2.5
Or see this region's nucleotide sequence