Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2130 and Psest_2131 are separated by 202 nucleotides Psest_2131 and Psest_2132 are separated by 63 nucleotides Psest_2132 and Psest_2133 are separated by 8 nucleotides
Psest_2130: Psest_2130 - exodeoxyribonuclease III, at 2,262,519 to 2,263,331
_2130
Psest_2131: Psest_2131 - Acetyltransferases, at 2,263,534 to 2,264,169
_2131
Psest_2132: Psest_2132 - Outer membrane protein, at 2,264,233 to 2,266,047
_2132
Psest_2133: Psest_2133 - Uncharacterized protein conserved in bacteria, at 2,266,056 to 2,269,724
_2133
Position (kb)
2264
2265
2266
2267 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2263.350 kb on + strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.455 kb on - strand at 2263.492 kb on + strand at 2263.493 kb on - strand at 2263.601 kb on - strand, within Psest_2131 at 2263.601 kb on - strand, within Psest_2131 at 2263.633 kb on + strand, within Psest_2131 at 2263.713 kb on - strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2264.065 kb on + strand, within Psest_2131 at 2264.168 kb on - strand at 2264.260 kb on - strand at 2264.270 kb on + strand at 2264.306 kb on + strand at 2264.307 kb on - strand at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2265.023 kb on - strand, within Psest_2132 at 2265.188 kb on + strand, within Psest_2132 at 2265.189 kb on - strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.209 kb on - strand, within Psest_2132 at 2265.209 kb on - strand, within Psest_2132 at 2265.259 kb on + strand, within Psest_2132 at 2265.260 kb on - strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.468 kb on + strand, within Psest_2132 at 2265.468 kb on + strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.493 kb on + strand, within Psest_2132 at 2265.493 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.500 kb on - strand, within Psest_2132 at 2265.628 kb on - strand, within Psest_2132 at 2265.694 kb on + strand, within Psest_2132 at 2265.694 kb on + strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.835 kb on + strand, within Psest_2132 at 2265.841 kb on + strand, within Psest_2132 at 2265.841 kb on + strand, within Psest_2132 at 2266.127 kb on + strand at 2266.128 kb on - strand at 2266.162 kb on + strand at 2266.426 kb on + strand, within Psest_2133 at 2266.426 kb on + strand, within Psest_2133 at 2266.427 kb on - strand, within Psest_2133 at 2266.520 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.717 kb on - strand, within Psest_2133 at 2266.953 kb on - strand, within Psest_2133 at 2267.008 kb on + strand, within Psest_2133 at 2267.009 kb on - strand, within Psest_2133
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 2,263,350 + -1.6 2,263,445 - -0.5 2,263,445 - -0.7 2,263,445 - +1.8 2,263,455 - -0.2 2,263,492 + -0.9 2,263,493 - -1.9 2,263,601 - Psest_2131 0.11 +0.5 2,263,601 - Psest_2131 0.11 +2.0 2,263,633 + Psest_2131 0.16 +1.9 2,263,713 - Psest_2131 0.28 -1.1 2,263,937 + Psest_2131 0.63 +0.1 2,263,937 + Psest_2131 0.63 +0.6 2,263,937 + Psest_2131 0.63 +0.3 2,263,937 + Psest_2131 0.63 -0.5 2,263,938 - Psest_2131 0.64 -1.2 2,263,938 - Psest_2131 0.64 -1.3 2,264,065 + Psest_2131 0.83 -2.0 2,264,168 - +1.8 2,264,260 - +0.4 2,264,270 + -2.4 2,264,306 + +1.2 2,264,307 - +2.5 2,264,452 + Psest_2132 0.12 +3.0 2,264,452 + Psest_2132 0.12 +1.0 2,264,452 + Psest_2132 0.12 -1.2 2,264,452 + Psest_2132 0.12 +2.5 2,264,452 + Psest_2132 0.12 +0.2 2,264,452 + Psest_2132 0.12 +0.9 2,264,452 + Psest_2132 0.12 +2.0 2,264,452 + Psest_2132 0.12 +2.5 2,264,453 - Psest_2132 0.12 +2.3 2,264,453 - Psest_2132 0.12 +1.7 2,264,453 - Psest_2132 0.12 +0.7 2,264,453 - Psest_2132 0.12 +1.5 2,264,453 - Psest_2132 0.12 +3.8 2,264,453 - Psest_2132 0.12 +1.1 2,264,453 - Psest_2132 0.12 +4.3 2,264,453 - Psest_2132 0.12 +2.5 2,264,453 - Psest_2132 0.12 +2.5 2,264,453 - Psest_2132 0.12 +1.3 2,264,456 + Psest_2132 0.12 +0.1 2,264,456 + Psest_2132 0.12 +2.6 2,264,456 + Psest_2132 0.12 -0.2 2,264,456 + Psest_2132 0.12 +1.5 2,264,456 + Psest_2132 0.12 +5.0 2,264,456 + Psest_2132 0.12 +0.4 2,264,456 + Psest_2132 0.12 +0.1 2,264,456 + Psest_2132 0.12 +0.6 2,264,456 + Psest_2132 0.12 +0.7 2,264,456 + Psest_2132 0.12 +3.0 2,264,456 + Psest_2132 0.12 -0.4 2,264,456 + Psest_2132 0.12 +1.4 2,264,457 - Psest_2132 0.12 +1.8 2,264,457 - Psest_2132 0.12 +0.6 2,264,457 - Psest_2132 0.12 -0.6 2,264,457 - Psest_2132 0.12 +3.4 2,264,457 - Psest_2132 0.12 +1.3 2,264,457 - Psest_2132 0.12 +1.2 2,264,457 - Psest_2132 0.12 +0.5 2,264,457 - Psest_2132 0.12 +2.0 2,264,457 - Psest_2132 0.12 +3.3 2,265,023 - Psest_2132 0.44 +1.0 2,265,188 + Psest_2132 0.53 +0.0 2,265,189 - Psest_2132 0.53 +2.8 2,265,208 + Psest_2132 0.54 +1.2 2,265,208 + Psest_2132 0.54 +2.4 2,265,208 + Psest_2132 0.54 +3.1 2,265,209 - Psest_2132 0.54 +4.5 2,265,209 - Psest_2132 0.54 +2.5 2,265,259 + Psest_2132 0.57 -0.0 2,265,260 - Psest_2132 0.57 -2.8 2,265,439 + Psest_2132 0.66 -0.9 2,265,439 + Psest_2132 0.66 +2.4 2,265,439 + Psest_2132 0.66 +0.6 2,265,439 + Psest_2132 0.66 +1.7 2,265,440 - Psest_2132 0.67 +1.2 2,265,440 - Psest_2132 0.67 +4.7 2,265,440 - Psest_2132 0.67 +2.1 2,265,440 - Psest_2132 0.67 -0.2 2,265,440 - Psest_2132 0.67 +0.5 2,265,440 - Psest_2132 0.67 +0.6 2,265,468 + Psest_2132 0.68 +1.8 2,265,468 + Psest_2132 0.68 -0.2 2,265,469 - Psest_2132 0.68 +1.2 2,265,469 - Psest_2132 0.68 +0.9 2,265,469 - Psest_2132 0.68 -0.8 2,265,493 + Psest_2132 0.69 +0.2 2,265,493 + Psest_2132 0.69 +2.4 2,265,499 + Psest_2132 0.70 +1.9 2,265,499 + Psest_2132 0.70 -0.5 2,265,499 + Psest_2132 0.70 +2.2 2,265,499 + Psest_2132 0.70 +2.5 2,265,500 - Psest_2132 0.70 +1.7 2,265,628 - Psest_2132 0.77 +0.8 2,265,694 + Psest_2132 0.80 +0.8 2,265,694 + Psest_2132 0.80 +1.7 2,265,722 - Psest_2132 0.82 +1.6 2,265,722 - Psest_2132 0.82 +2.2 2,265,722 - Psest_2132 0.82 +0.6 2,265,835 + Psest_2132 0.88 +1.7 2,265,841 + Psest_2132 0.89 +3.6 2,265,841 + Psest_2132 0.89 +2.1 2,266,127 + +0.5 2,266,128 - +4.6 2,266,162 + +0.3 2,266,426 + Psest_2133 0.10 +1.4 2,266,426 + Psest_2133 0.10 +1.0 2,266,427 - Psest_2133 0.10 +2.0 2,266,520 + Psest_2133 0.13 -0.0 2,266,522 + Psest_2133 0.13 +0.8 2,266,522 + Psest_2133 0.13 +1.7 2,266,522 + Psest_2133 0.13 +1.5 2,266,522 + Psest_2133 0.13 +3.1 2,266,522 + Psest_2133 0.13 +2.9 2,266,522 + Psest_2133 0.13 +0.3 2,266,522 + Psest_2133 0.13 +1.9 2,266,522 + Psest_2133 0.13 +1.5 2,266,522 + Psest_2133 0.13 +1.8 2,266,522 + Psest_2133 0.13 +3.0 2,266,522 + Psest_2133 0.13 +2.8 2,266,522 + Psest_2133 0.13 +1.2 2,266,523 - Psest_2133 0.13 -0.0 2,266,523 - Psest_2133 0.13 +1.9 2,266,523 - Psest_2133 0.13 +2.5 2,266,523 - Psest_2133 0.13 +0.1 2,266,523 - Psest_2133 0.13 -1.0 2,266,717 - Psest_2133 0.18 +1.8 2,266,953 - Psest_2133 0.24 +2.3 2,267,008 + Psest_2133 0.26 -0.0 2,267,009 - Psest_2133 0.26 +1.7
Or see this region's nucleotide sequence