Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0791

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
862,431	+		Psest_0789	0.14	-0.7
862,432	-		Psest_0789	0.14	-0.6
862,432	-		Psest_0789	0.14	-2.6
862,618	+		Psest_0789	0.67	-0.3
862,618	+		Psest_0789	0.67	-1.5
862,618	+		Psest_0789	0.67	-1.2
862,618	+		Psest_0789	0.67	-1.0
862,618	+		Psest_0789	0.67	-0.5
862,618	+		Psest_0789	0.67	+0.9
862,619	-		Psest_0789	0.67	-0.6
862,625	+		Psest_0789	0.69	-0.5
862,626	-		Psest_0789	0.69	-1.1
862,810	-				-1.2
862,989	+		Psest_0790	0.42	+0.4
863,083	+		Psest_0790	0.63	-0.5
863,083	+		Psest_0790	0.63	+0.1
863,084	-		Psest_0790	0.64	+1.5
863,229	+				+0.9
863,229	+				-0.1
863,229	+				-2.1
863,229	+				-0.2
863,230	-				+0.5
863,230	-				+4.2
863,370	+				-0.6
863,371	-				-1.4
863,422	+				+1.5
863,527	+				-1.1
863,887	+		Psest_0791	0.38	-0.6
863,888	-		Psest_0791	0.38	-0.5
864,277	+		Psest_0791	0.69	+1.2
864,277	+		Psest_0791	0.69	-0.5
864,277	+		Psest_0791	0.69	-1.1
864,277	+		Psest_0791	0.69	-1.9
864,277	+		Psest_0791	0.69	-1.1
864,277	+		Psest_0791	0.69	+1.1
864,277	+		Psest_0791	0.69	-1.2
864,278	-		Psest_0791	0.69	-1.8
864,278	-		Psest_0791	0.69	+0.2
864,289	+		Psest_0791	0.70	-0.3
864,475	+		Psest_0791	0.85	-1.1
864,475	+		Psest_0791	0.85	-0.9
864,634	+				-0.6
864,634	+				-0.1
864,638	+				+1.2
864,639	-				-0.4
864,639	-				-0.1
864,639	-				-0.2
864,639	-				+1.7
864,639	-				-0.5
864,775	+				+1.1
864,775	+				-0.9
864,776	-				+1.0
864,776	-				+0.5
864,776	-				-0.2
864,776	-				-0.1
864,776	-				-1.0
864,787	+				-1.5
864,787	+				+2.0
864,788	-				+1.2
864,896	+				-0.8
864,896	+				+0.4
864,896	+				+2.0
864,896	+				+0.1
864,896	+				-0.6
864,896	+				-0.7
864,897	-				-0.2
864,897	-				-0.4
864,897	-				-0.6
864,897	-				+1.3
864,897	-				-1.3
864,897	-				+0.9
864,925	+				-0.5
864,925	+				-0.5
864,925	+				+0.6
864,926	-				-1.5
864,990	-				+0.6
865,048	-				+0.6
865,117	-				+0.7
865,158	+		Psest_0792	0.10	+1.3
865,197	+		Psest_0792	0.12	+0.3
865,198	-		Psest_0792	0.12	-0.2
865,260	+		Psest_0792	0.15	-0.2
865,260	+		Psest_0792	0.15	+0.3
865,260	+		Psest_0792	0.15	+0.3
865,260	+		Psest_0792	0.15	-1.7
865,261	-		Psest_0792	0.15	-1.8
865,261	-		Psest_0792	0.15	+0.4
865,261	-		Psest_0792	0.15	-0.1
865,261	-		Psest_0792	0.15	+1.0
865,261	-		Psest_0792	0.15	-0.6
865,335	+		Psest_0792	0.18	+2.0
865,335	+		Psest_0792	0.18	+1.2
865,335	+		Psest_0792	0.18	-0.8
865,335	+		Psest_0792	0.18	+0.0
865,335	+		Psest_0792	0.18	+1.2
865,335	+		Psest_0792	0.18	+0.0
865,335	+		Psest_0792	0.18	+1.1
865,336	-		Psest_0792	0.18	-0.2