Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3720

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,886,980	+		Psest_3719	0.24	-1.0
3,886,981	-		Psest_3719	0.24	-0.9
3,886,981	-		Psest_3719	0.24	-0.2
3,887,020	+		Psest_3719	0.28	+1.1
3,887,020	+		Psest_3719	0.28	+0.1
3,887,091	+		Psest_3719	0.35	-2.5
3,887,091	+		Psest_3719	0.35	-0.5
3,887,091	+		Psest_3719	0.35	+0.3
3,887,091	+		Psest_3719	0.35	-0.6
3,887,091	+		Psest_3719	0.35	+0.1
3,887,092	-		Psest_3719	0.35	-0.4
3,887,092	-		Psest_3719	0.35	-0.3
3,887,092	-		Psest_3719	0.35	-1.2
3,887,092	-		Psest_3719	0.35	+0.5
3,887,137	+		Psest_3719	0.39	+0.3
3,887,137	+		Psest_3719	0.39	-1.9
3,887,137	+		Psest_3719	0.39	-1.8
3,887,137	+		Psest_3719	0.39	+0.7
3,887,138	-		Psest_3719	0.39	+1.0
3,887,138	-		Psest_3719	0.39	-1.6
3,887,138	-		Psest_3719	0.39	-0.3
3,887,138	-		Psest_3719	0.39	-1.6
3,887,189	+		Psest_3719	0.44	+2.0
3,887,190	-		Psest_3719	0.44	-2.0
3,887,190	-		Psest_3719	0.44	+0.5
3,887,190	-		Psest_3719	0.44	+0.3
3,887,190	-		Psest_3719	0.44	+1.1
3,887,190	-		Psest_3719	0.44	+0.3
3,887,194	-		Psest_3719	0.44	-1.5
3,887,270	-		Psest_3719	0.51	+1.1
3,887,446	+		Psest_3719	0.68	+1.0
3,887,446	+		Psest_3719	0.68	+0.7
3,887,446	+		Psest_3719	0.68	-1.0
3,887,446	+		Psest_3719	0.68	+0.4
3,887,447	-		Psest_3719	0.68	-1.3
3,887,447	-		Psest_3719	0.68	+0.5
3,887,447	-		Psest_3719	0.68	+0.7
3,887,447	-		Psest_3719	0.68	+1.0
3,887,447	-		Psest_3719	0.68	+0.4
3,887,447	-		Psest_3719	0.68	-0.0
3,887,466	-		Psest_3719	0.70	+0.6
3,887,466	-		Psest_3719	0.70	+0.7
3,887,574	-		Psest_3719	0.80	+0.3
3,887,574	-		Psest_3719	0.80	-0.3
3,887,586	+		Psest_3719	0.81	-2.9
3,887,586	+		Psest_3719	0.81	-0.6
3,887,587	-		Psest_3719	0.81	+0.1
3,887,587	-		Psest_3719	0.81	+0.5
3,887,587	-		Psest_3719	0.81	+0.3
3,887,587	-		Psest_3719	0.81	+1.0
3,887,587	-		Psest_3719	0.81	+1.0
3,887,707	-				+0.8
3,887,768	+				-0.2
3,887,799	-				+1.0
3,887,827	-				-0.9
3,887,827	-				+0.5
3,887,845	+				-0.8
3,887,894	-				-1.3
3,887,896	-				+0.5
3,887,896	-				+2.0
3,888,091	+				+1.0
3,888,091	+				+1.5
3,888,091	+				+1.0
3,888,092	-				+4.4
3,888,097	+				+1.5
3,888,097	+				-1.3
3,888,117	+				+2.1
3,888,118	-				-1.9
3,888,247	-		Psest_3720	0.12	+3.4
3,888,289	+		Psest_3720	0.13	-0.4
3,888,351	+		Psest_3720	0.16	+1.3
3,888,351	+		Psest_3720	0.16	+0.9
3,888,351	+		Psest_3720	0.16	+1.5
3,888,351	+		Psest_3720	0.16	-1.8
3,888,352	-		Psest_3720	0.16	+1.5
3,888,453	+		Psest_3720	0.20	+1.4
3,888,453	+		Psest_3720	0.20	+2.2
3,888,453	+		Psest_3720	0.20	+0.3
3,888,453	+		Psest_3720	0.20	+1.9
3,888,453	+		Psest_3720	0.20	+0.9
3,888,453	+		Psest_3720	0.20	+0.1
3,888,454	-		Psest_3720	0.20	-0.2
3,888,468	+		Psest_3720	0.21	-1.2
3,888,468	+		Psest_3720	0.21	+1.2
3,888,469	-		Psest_3720	0.21	+2.2
3,888,469	-		Psest_3720	0.21	+2.9
3,888,469	-		Psest_3720	0.21	+1.3
3,888,469	-		Psest_3720	0.21	+1.9
3,888,469	-		Psest_3720	0.21	+0.5
3,888,469	-		Psest_3720	0.21	+0.6
3,888,487	-		Psest_3720	0.21	+1.0
3,888,513	+		Psest_3720	0.22	+2.5
3,888,513	+		Psest_3720	0.22	+3.2
3,888,514	-		Psest_3720	0.23	-0.3
3,888,514	-		Psest_3720	0.23	+3.3
3,888,514	-		Psest_3720	0.23	+0.1
3,888,516	+		Psest_3720	0.23	-0.2
3,888,680	+		Psest_3720	0.29	+2.8
3,888,680	+		Psest_3720	0.29	+1.7
3,888,680	+		Psest_3720	0.29	+2.5
3,888,681	-		Psest_3720	0.29	-1.5
3,888,681	-		Psest_3720	0.29	+3.3
3,888,681	-		Psest_3720	0.29	+3.4
3,888,681	-		Psest_3720	0.29	+0.3
3,888,681	-		Psest_3720	0.29	+2.8
3,888,753	+		Psest_3720	0.32	+0.7
3,888,753	+		Psest_3720	0.32	+2.1
3,888,753	+		Psest_3720	0.32	+0.5
3,888,753	+		Psest_3720	0.32	+0.9
3,888,753	+		Psest_3720	0.32	-0.7
3,888,753	+		Psest_3720	0.32	+0.1
3,888,753	+		Psest_3720	0.32	+1.7
3,888,753	+		Psest_3720	0.32	-0.6
3,888,753	+		Psest_3720	0.32	-0.6
3,888,753	+		Psest_3720	0.32	+1.1
3,888,753	+		Psest_3720	0.32	+1.2
3,888,753	+		Psest_3720	0.32	+1.6
3,888,753	+		Psest_3720	0.32	+1.8
3,888,753	+		Psest_3720	0.32	+1.2
3,888,753	+		Psest_3720	0.32	+1.0
3,888,753	+		Psest_3720	0.32	+1.9
3,888,754	-		Psest_3720	0.32	+1.8
3,888,754	-		Psest_3720	0.32	+1.4
3,888,754	-		Psest_3720	0.32	+1.1
3,888,754	-		Psest_3720	0.32	+3.5
3,888,754	-		Psest_3720	0.32	+2.1
3,888,754	-		Psest_3720	0.32	-1.7
3,888,754	-		Psest_3720	0.32	+0.6
3,888,754	-		Psest_3720	0.32	-0.7
3,888,754	-		Psest_3720	0.32	+2.5
3,888,754	-		Psest_3720	0.32	+2.3
3,888,754	-		Psest_3720	0.32	+1.7
3,888,754	-		Psest_3720	0.32	+2.3
3,888,754	-		Psest_3720	0.32	+2.5
3,888,754	-		Psest_3720	0.32	+1.7
3,888,754	-		Psest_3720	0.32	+0.8
3,888,754	-		Psest_3720	0.32	+0.9
3,888,754	-		Psest_3720	0.32	-0.8
3,888,754	-		Psest_3720	0.32	+2.0
3,888,755	+		Psest_3720	0.32	+0.9
3,888,756	-		Psest_3720	0.32	+1.4
3,888,807	+		Psest_3720	0.35	-1.5
3,888,807	+		Psest_3720	0.35	+2.7
3,888,807	+		Psest_3720	0.35	+1.5
3,888,807	+		Psest_3720	0.35	+1.7
3,888,807	+		Psest_3720	0.35	+3.4
3,888,807	+		Psest_3720	0.35	+1.3
3,888,807	+		Psest_3720	0.35	+0.5
3,888,807	+		Psest_3720	0.35	+2.2
3,888,807	+		Psest_3720	0.35	+1.6
3,888,808	-		Psest_3720	0.35	-0.9
3,888,808	-		Psest_3720	0.35	-0.2
3,888,894	+		Psest_3720	0.38	-1.2
3,888,894	+		Psest_3720	0.38	+0.9
3,888,978	+		Psest_3720	0.42	+2.3
3,888,978	+		Psest_3720	0.42	+0.8
3,888,979	-		Psest_3720	0.42	+1.2
3,889,163	-		Psest_3720	0.49	+0.8
3,889,163	-		Psest_3720	0.49	-1.4
3,889,308	+		Psest_3720	0.55	+1.2
3,889,308	+		Psest_3720	0.55	+1.3
3,889,309	-		Psest_3720	0.55	+3.9
3,889,309	-		Psest_3720	0.55	+1.1
3,889,309	-		Psest_3720	0.55	+1.1
3,889,365	+		Psest_3720	0.58	+1.4
3,889,365	+		Psest_3720	0.58	+3.6
3,889,365	+		Psest_3720	0.58	+1.4
3,889,365	+		Psest_3720	0.58	-0.2
3,889,365	+		Psest_3720	0.58	+0.7
3,889,365	+		Psest_3720	0.58	+0.9
3,889,365	+		Psest_3720	0.58	+3.5
3,889,365	+		Psest_3720	0.58	+1.0
3,889,365	+		Psest_3720	0.58	+0.1
3,889,365	+		Psest_3720	0.58	+1.5
3,889,365	+		Psest_3720	0.58	+0.6
3,889,365	+		Psest_3720	0.58	+2.0
3,889,365	+		Psest_3720	0.58	-0.9
3,889,365	+		Psest_3720	0.58	+3.7
3,889,366	-		Psest_3720	0.58	+1.4
3,889,366	-		Psest_3720	0.58	+0.4
3,889,366	-		Psest_3720	0.58	+0.3
3,889,366	-		Psest_3720	0.58	+0.9
3,889,366	-		Psest_3720	0.58	+2.3
3,889,366	-		Psest_3720	0.58	+1.5
3,889,389	+		Psest_3720	0.59	+1.1
3,889,513	+		Psest_3720	0.64	+0.3
3,889,514	-		Psest_3720	0.64	+0.5
3,889,514	-		Psest_3720	0.64	+3.2
3,889,514	-		Psest_3720	0.64	+0.2
3,889,514	-		Psest_3720	0.64	+0.9
3,889,515	+		Psest_3720	0.64	+2.7
3,889,515	+		Psest_3720	0.64	-0.1
3,889,515	+		Psest_3720	0.64	+2.1
3,889,515	+		Psest_3720	0.64	+3.1
3,889,515	+		Psest_3720	0.64	+2.0
3,889,515	+		Psest_3720	0.64	+2.0
3,889,515	+		Psest_3720	0.64	+3.1
3,889,516	-		Psest_3720	0.64	+1.6
3,889,516	-		Psest_3720	0.64	-1.3
3,889,516	-		Psest_3720	0.64	+1.4
3,889,516	-		Psest_3720	0.64	+1.2
3,889,516	-		Psest_3720	0.64	+2.1
3,889,581	+		Psest_3720	0.66	+0.8
3,889,582	-		Psest_3720	0.66	-1.9
3,889,582	-		Psest_3720	0.66	+1.0
3,889,582	-		Psest_3720	0.66	-0.2
3,889,582	-		Psest_3720	0.66	+0.7
3,889,582	-		Psest_3720	0.66	+2.9
3,889,719	+		Psest_3720	0.72	+1.4
3,889,760	-		Psest_3720	0.74	+0.1
3,889,914	-		Psest_3720	0.80	+1.1
3,889,920	+		Psest_3720	0.80	+1.9
3,889,921	-		Psest_3720	0.80	+2.2
3,889,921	-		Psest_3720	0.80	+3.9
3,889,921	-		Psest_3720	0.80	+3.0
3,889,921	-		Psest_3720	0.80	+1.4
3,890,053	-		Psest_3720	0.86	+1.7
3,890,159	+				+1.6
3,890,277	+				+1.3
3,890,421	+				+2.0
3,890,421	+				-0.5
3,890,422	-				-0.2
3,890,474	+				-0.7
3,890,475	-				-0.9
3,890,475	-				-1.5
3,890,500	-				+3.8
3,890,607	+		Psest_3721	0.11	-1.8
3,890,607	+		Psest_3721	0.11	+0.4
3,890,607	+		Psest_3721	0.11	-0.9
3,890,607	+		Psest_3721	0.11	+0.3
3,890,783	-		Psest_3721	0.25	+0.6
3,891,030	+		Psest_3721	0.45	+2.3
3,891,030	+		Psest_3721	0.45	+0.9
3,891,030	+		Psest_3721	0.45	+1.4
3,891,030	+		Psest_3721	0.45	+0.1
3,891,031	-		Psest_3721	0.45	+0.9
3,891,031	-		Psest_3721	0.45	-3.2
3,891,031	-		Psest_3721	0.45	+0.2
3,891,089	-		Psest_3721	0.49	+0.7
3,891,358	+		Psest_3721	0.71	+0.4
3,891,358	+		Psest_3721	0.71	+0.4
3,891,358	+		Psest_3721	0.71	+2.2
3,891,359	-		Psest_3721	0.71	+1.0
3,891,359	-		Psest_3721	0.71	-0.5