Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3488

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,659,959	+		Psest_3487	0.39	-2.1
3,659,959	+		Psest_3487	0.39	+1.4
3,659,959	+		Psest_3487	0.39	-1.4
3,659,959	+		Psest_3487	0.39	-1.5
3,659,960	-		Psest_3487	0.39	+0.2
3,659,960	-		Psest_3487	0.39	+0.3
3,659,960	-		Psest_3487	0.39	-0.0
3,659,979	+		Psest_3487	0.41	-1.6
3,659,979	+		Psest_3487	0.41	-1.3
3,659,980	-		Psest_3487	0.41	-0.0
3,659,980	-		Psest_3487	0.41	+0.3
3,659,995	+		Psest_3487	0.42	+0.4
3,659,995	+		Psest_3487	0.42	-1.4
3,659,996	-		Psest_3487	0.42	+0.4
3,659,996	-		Psest_3487	0.42	+0.5
3,660,289	+		Psest_3487	0.62	+1.3
3,660,292	+		Psest_3487	0.62	+0.1
3,660,292	+		Psest_3487	0.62	-1.2
3,660,292	+		Psest_3487	0.62	+1.2
3,660,292	+		Psest_3487	0.62	-0.9
3,660,292	+		Psest_3487	0.62	-0.9
3,660,430	+		Psest_3487	0.71	+0.2
3,660,431	-		Psest_3487	0.71	+0.1
3,660,431	-		Psest_3487	0.71	+1.2
3,660,431	-		Psest_3487	0.71	+0.4
3,660,787	+				+0.3
3,660,787	+				-0.6
3,660,787	+				+2.4
3,660,787	+				-0.7
3,660,787	+				+0.2
3,660,787	+				+0.6
3,660,787	+				-0.9
3,660,788	-				+0.2
3,660,788	-				+1.6
3,660,788	-				-2.6
3,660,788	-				-2.1
3,660,788	-				-0.7
3,660,788	-				-0.0
3,660,788	-				+0.6
3,660,788	-				+2.0
3,660,848	+				-1.0
3,660,848	+				+0.4
3,660,848	+				+0.2
3,660,849	-				+1.1
3,660,951	+		Psest_3488	0.17	+1.3
3,660,951	+		Psest_3488	0.17	-1.4
3,660,951	+		Psest_3488	0.17	+0.2
3,660,951	+		Psest_3488	0.17	+2.6
3,660,951	+		Psest_3488	0.17	+1.3
3,660,951	+		Psest_3488	0.17	-2.2
3,660,951	+		Psest_3488	0.17	-0.0
3,660,952	-		Psest_3488	0.17	+2.3
3,660,952	-		Psest_3488	0.17	+0.6
3,661,315	-				+0.6
3,661,366	-				-0.1
3,661,366	-				-0.9
3,661,383	+				-2.1
3,661,383	+				+0.6
3,661,383	+				-0.6
3,661,384	-				-0.1
3,661,384	-				-0.3
3,661,384	-				-0.0
3,661,384	-				-0.1
3,661,416	+				+0.4
3,661,435	-				-1.1
3,661,557	+		Psest_3489	0.13	-0.9
3,661,557	+		Psest_3489	0.13	-1.4
3,661,558	-		Psest_3489	0.13	-1.5
3,661,558	-		Psest_3489	0.13	+0.1
3,661,558	-		Psest_3489	0.13	+0.6
3,661,558	-		Psest_3489	0.13	-0.6
3,661,647	+		Psest_3489	0.19	-0.6
3,661,647	+		Psest_3489	0.19	-1.6
3,661,647	+		Psest_3489	0.19	-0.2
3,661,647	+		Psest_3489	0.19	-1.0
3,661,648	-		Psest_3489	0.19	+0.4
3,661,648	-		Psest_3489	0.19	-0.4
3,661,648	-		Psest_3489	0.19	-0.7
3,661,671	+		Psest_3489	0.20	-0.7
3,661,690	-		Psest_3489	0.21	+0.2
3,661,821	+		Psest_3489	0.29	+0.5
3,661,821	+		Psest_3489	0.29	-0.1
3,661,822	-		Psest_3489	0.30	-0.7
3,661,965	+		Psest_3489	0.38	+0.7
3,661,965	+		Psest_3489	0.38	-1.9
3,661,965	+		Psest_3489	0.38	+2.2
3,661,965	+		Psest_3489	0.38	+2.3
3,661,965	+		Psest_3489	0.38	+1.4
3,661,965	+		Psest_3489	0.38	-2.5
3,661,965	+		Psest_3489	0.38	+0.1
3,661,965	+		Psest_3489	0.38	+0.4
3,661,965	+		Psest_3489	0.38	+0.5
3,661,966	-		Psest_3489	0.39	+0.9
3,661,966	-		Psest_3489	0.39	+0.1
3,661,966	-		Psest_3489	0.39	-1.6
3,661,966	-		Psest_3489	0.39	-0.6
3,661,966	-		Psest_3489	0.39	-0.8
3,661,966	-		Psest_3489	0.39	-0.3
3,662,136	+		Psest_3489	0.49	+2.6
3,662,137	-		Psest_3489	0.49	-0.3
3,662,137	-		Psest_3489	0.49	+2.6
3,662,142	+		Psest_3489	0.50	+0.9
3,662,143	-		Psest_3489	0.50	-0.5