Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3470

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,639,562	+				+1.0
3,639,563	-				-0.5
3,639,563	-				-0.3
3,639,563	-				+0.1
3,639,563	-				+1.2
3,639,563	-				+1.0
3,639,564	+				+0.8
3,639,564	+				+0.4
3,639,564	+				+0.3
3,639,564	+				+0.2
3,639,564	+				+0.5
3,639,564	+				-0.5
3,639,565	-				+0.6
3,639,565	-				-1.9
3,639,565	-				-0.1
3,639,565	-				-1.6
3,639,565	-				+0.4
3,639,679	-		Psest_3469	0.15	-1.5
3,639,879	+		Psest_3469	0.36	-0.0
3,639,936	+		Psest_3469	0.42	-0.0
3,639,936	+		Psest_3469	0.42	+1.2
3,639,936	+		Psest_3469	0.42	+1.3
3,639,937	-		Psest_3469	0.42	-0.7
3,640,095	+		Psest_3469	0.58	-0.2
3,640,095	+		Psest_3469	0.58	-0.6
3,640,095	+		Psest_3469	0.58	+1.4
3,640,095	+		Psest_3469	0.58	-1.1
3,640,095	+		Psest_3469	0.58	-2.5
3,640,095	+		Psest_3469	0.58	+1.6
3,640,096	-		Psest_3469	0.58	+0.6
3,640,096	-		Psest_3469	0.58	+0.4
3,640,096	-		Psest_3469	0.58	-1.2
3,640,096	-		Psest_3469	0.58	-0.4
3,640,096	-		Psest_3469	0.58	+0.4
3,640,096	-		Psest_3469	0.58	-0.9
3,640,096	-		Psest_3469	0.58	+0.9
3,640,227	+		Psest_3469	0.72	-0.0
3,640,227	+		Psest_3469	0.72	+0.1
3,640,228	-		Psest_3469	0.72	-0.9
3,640,228	-		Psest_3469	0.72	+0.3
3,640,228	-		Psest_3469	0.72	-0.9
3,640,228	-		Psest_3469	0.72	+0.0
3,640,254	-		Psest_3469	0.75	-0.2
3,640,290	+		Psest_3469	0.79	+0.6
3,640,356	+		Psest_3469	0.86	-1.3
3,640,356	+		Psest_3469	0.86	+0.3
3,640,356	+		Psest_3469	0.86	-0.6
3,640,356	+		Psest_3469	0.86	-0.6
3,640,356	+		Psest_3469	0.86	+0.7
3,640,356	+		Psest_3469	0.86	-0.3
3,640,357	-		Psest_3469	0.86	+1.1
3,640,357	-		Psest_3469	0.86	+0.5
3,640,412	+				-0.4
3,640,412	+				-0.7
3,640,412	+				-1.2
3,640,412	+				-0.3
3,640,413	-				+0.6
3,640,473	+				+0.5
3,640,689	+		Psest_3470	0.36	+1.1
3,640,740	+		Psest_3470	0.48	+1.1
3,640,772	+		Psest_3470	0.57	+0.8
3,640,786	+		Psest_3470	0.60	+1.9
3,640,786	+		Psest_3470	0.60	+1.1
3,640,888	+		Psest_3470	0.86	+0.3
3,640,888	+		Psest_3470	0.86	+0.8
3,640,972	+				+0.5
3,640,972	+				-0.1
3,640,972	+				-0.1
3,640,972	+				-1.7
3,640,972	+				-0.4
3,640,972	+				-1.1
3,640,972	+				-0.6
3,640,972	+				-0.6
3,640,972	+				-0.0
3,640,972	+				+2.0
3,640,972	+				+1.5
3,640,972	+				-1.1
3,640,972	+				-0.3
3,640,972	+				-0.3
3,640,972	+				-1.5
3,640,972	+				-0.6
3,640,973	-				+0.6
3,640,973	-				-0.3
3,640,973	-				+0.3
3,640,973	-				+0.7
3,640,973	-				-0.3
3,640,973	-				+0.2
3,640,973	-				+0.6
3,640,973	-				+0.1
3,640,973	-				+0.3
3,640,973	-				-0.3
3,640,973	-				+0.6
3,640,973	-				-0.4
3,640,973	-				-0.7
3,641,034	+				+1.4
3,641,034	+				+0.7
3,641,034	+				-0.0
3,641,034	+				-0.4
3,641,035	-				+2.2
3,641,035	-				-0.6
3,641,035	-				+0.6
3,641,035	-				+0.6
3,641,035	-				-1.7
3,641,035	-				+0.4
3,641,045	+				+0.4
3,641,045	+				-0.7
3,641,045	+				-1.6
3,641,046	-				-0.0
3,641,046	-				-1.1
3,641,046	-				+0.5
3,641,125	+				-0.5
3,641,125	+				+0.3
3,641,125	+				+0.1
3,641,125	+				+0.5
3,641,126	-				-0.4
3,641,126	-				+0.3
3,641,643	+		Psest_3471	0.80	-2.2
3,641,643	+		Psest_3471	0.80	+0.3
3,641,644	-		Psest_3471	0.80	-0.3
3,641,644	-		Psest_3471	0.80	+0.2
3,641,644	-		Psest_3471	0.80	-1.7
3,641,644	-		Psest_3471	0.80	+2.0
3,641,644	-		Psest_3471	0.80	+0.6
3,641,644	-		Psest_3471	0.80	-0.0
3,641,646	+		Psest_3471	0.80	+0.3
3,641,646	+		Psest_3471	0.80	+2.2
3,641,646	+		Psest_3471	0.80	-0.0
3,641,647	-		Psest_3471	0.80	+1.3
3,641,719	-				-0.4
3,641,851	+				-1.2
3,641,903	+				-0.4
3,641,903	+				+0.1
3,641,904	-				+1.2